RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.55□□□□□ -0.08
CDT1-202ENST00000562747 HTR3EA5X5Y0 456 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 SLC43A1O75387 559 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 KRT33AO76009 404 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 OR6A2O95222 327 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 HIST1H2ABP04908 130 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 ASAH2BP0C7U1 165 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 ADORA3P0DMS8 318 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 AHCYP23526 432 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 PCSK6P29122 969 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 FOXG1P55316 489 aaPredicted RBP14.55□□□□□ -0.08
CDT1-202ENST00000562747 ZP4Q12836 540 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 PPA1Q15181 289 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 STK11Q15831 433 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 GABRA6Q16445 453 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 C1QTNF12Q5T7M4 302 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 HIST3H2AQ7L7L0 130 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 SLC46A3Q7Z3Q1 461 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 ARHGAP24Q8N264 748 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 C17orf78Q8N4C9 275 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 RBM15BQ8NDT2 890 aaKnown RBP14.55□□□□□ -0.08
CDT1-202ENST00000562747 LIPHQ8WWY8 451 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 HIST1H2ACQ93077 130 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 BOD1Q96IK1 185 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 Q96MF0 132 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 FNDC11Q9BVV2 318 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 SNX13Q9Y5W8 968 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 TLN2Q9Y4G6 2542 aa14.55□□□□□ -0.08
CDT1-202ENST00000562747 TRIM64A6NGJ6 449 aa14.54□□□□□ -0.08
CDT1-202ENST00000562747 TRIM64BA6NI03 449 aa14.54□□□□□ -0.08
CDT1-202ENST00000562747 ZNF587BE7ETH6 402 aa14.54□□□□□ -0.08
CDT1-202ENST00000562747 J3KTA2 159 aa14.54□□□□□ -0.08
CDT1-202ENST00000562747 FFAR1O14842 300 aa14.54□□□□□ -0.08
CDT1-202ENST00000562747 SMAD7O15105 426 aaKnown RBP14.54□□□□□ -0.08
CDT1-202ENST00000562747 UMPSP11172 480 aa14.54□□□□□ -0.08
CDT1-202ENST00000562747 HLA-DOBP13765 273 aa14.54□□□□□ -0.08
CDT1-202ENST00000562747 YAP1P46937 504 aaKnown RBP14.54□□□□□ -0.08
CDT1-202ENST00000562747 POU3F1Q03052 451 aaPredicted RBP14.54□□□□□ -0.08
CDT1-202ENST00000562747 TRAM2Q15035 370 aa14.54□□□□□ -0.08
CDT1-202ENST00000562747 NHLRC1Q6VVB1 395 aa14.54□□□□□ -0.08
CDT1-202ENST00000562747 CYP4Z1Q86W10 505 aa14.54□□□□□ -0.08
CDT1-202ENST00000562747 LRRC75A-AS1Q8N1F1 130 aa14.54□□□□□ -0.08
CDT1-202ENST00000562747 PIK3C3Q8NEB9 887 aa14.54□□□□□ -0.08
CDT1-202ENST00000562747 ANKK1Q8NFD2 765 aa14.54□□□□□ -0.08
CDT1-202ENST00000562747 PFN4Q8NHR9 129 aa14.54□□□□□ -0.08
CDT1-202ENST00000562747 SGTBQ96EQ0 304 aa14.54□□□□□ -0.08
CDT1-202ENST00000562747 PLPPR2Q96GM1 343 aa14.54□□□□□ -0.08
CDT1-202ENST00000562747 NSMCE2Q96MF7 247 aa14.54□□□□□ -0.08
CDT1-202ENST00000562747 HS3ST6Q96QI5 342 aa14.54□□□□□ -0.08
CDT1-202ENST00000562747 OR2M2Q96R28 347 aa14.54□□□□□ -0.08
CDT1-202ENST00000562747 TAS2R5Q9NYW4 299 aa14.54□□□□□ -0.08
CDT1-202ENST00000562747 ENPP4Q9Y6X5 453 aa14.54□□□□□ -0.08
CDT1-202ENST00000562747 RPL36A-HNRNPH2H7BZ11 118 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 ARPC2O15144 300 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 ARHGEF9O43307 516 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 SMPD2O60906 423 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 UPK3AO75631 287 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 OR7A10O76100 309 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 PRSS23O95084 383 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 T-ENOLP0DO92 83 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 FUT1P19526 365 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 C9orf135Q5VTT2 229 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 ALKBH2Q6NS38 261 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 SEZ6L2Q6UXD5 910 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 TRPM8Q7Z2W7 1104 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 NANOGNBQ7Z5D8 188 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 TMEM123Q8N131 208 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 LRRC17Q8N6Y2 441 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 PYURFQ96I23 114 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 ALKBH3Q96Q83 286 aaPredicted RBP14.53□□□□□ -0.08
CDT1-202ENST00000562747 PIP5K1AQ99755 562 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 C1orf21Q9H246 121 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 ANKRD19PQ9H560 264 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 ESRP2Q9H6T0 727 aaKnown RBP14.53□□□□□ -0.08
CDT1-202ENST00000562747 MAN2C1Q9NTJ4 1040 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 C20orf141Q9NUB4 165 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 RHCGQ9UBD6 479 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 AMDHD2Q9Y303 409 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 SLC25A15Q9Y619 301 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 ARID1AO14497 2285 aa14.53□□□□□ -0.08
CDT1-202ENST00000562747 FAM171A2A8MVW0 826 aa14.52□□□□□ -0.09
CDT1-202ENST00000562747 C11orf98E9PRG8 122 aa14.52□□□□□ -0.09
CDT1-202ENST00000562747 RHCEP18577 417 aa14.52□□□□□ -0.09
CDT1-202ENST00000562747 MSX2P35548 267 aaPredicted RBP14.52□□□□□ -0.09
CDT1-202ENST00000562747 SH3BGRP55822 239 aaPredicted RBP14.52□□□□□ -0.09
CDT1-202ENST00000562747 LGALS3BPQ08380 585 aa14.52□□□□□ -0.09
CDT1-202ENST00000562747 NCMAPQ5T1S8 102 aa14.52□□□□□ -0.09
CDT1-202ENST00000562747 HMBOX1Q6NT76 420 aa14.52□□□□□ -0.09
CDT1-202ENST00000562747 LINGO2Q7L985 606 aa14.52□□□□□ -0.09
CDT1-202ENST00000562747 TSEN54Q7Z6J9 526 aaKnown RBP14.52□□□□□ -0.09
CDT1-202ENST00000562747 YTHDF3Q7Z739 585 aaKnown RBP14.52□□□□□ -0.09
CDT1-202ENST00000562747 RNF113BQ8IZP6 322 aaKnown RBP14.52□□□□□ -0.09
CDT1-202ENST00000562747 GPR137CQ8N3F9 429 aa14.52□□□□□ -0.09
CDT1-202ENST00000562747 C7orf34Q96L11 122 aa14.52□□□□□ -0.09
CDT1-202ENST00000562747 LRR1Q96L50 414 aa14.52□□□□□ -0.09
CDT1-202ENST00000562747 ADAD1Q96M93 576 aaKnown RBP14.52□□□□□ -0.09
CDT1-202ENST00000562747 TMEM204Q9BSN7 226 aa14.52□□□□□ -0.09
CDT1-202ENST00000562747 UBTD1Q9HAC8 227 aa14.52□□□□□ -0.09
CDT1-202ENST00000562747 SLC17A5Q9NRA2 495 aa14.52□□□□□ -0.09
CDT1-202ENST00000562747 MED29Q9NX70 200 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms