RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 RP2O75695 350 aa9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 ARAFP10398 606 aa9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 ZNF14P17017 642 aaPredicted RBP9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 PCMT1P22061 227 aa9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 ACHEP22303 614 aa9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 ZFP36P26651 326 aaKnown RBP9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 SH3BGRP55822 239 aaPredicted RBP9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 LCN2P80188 198 aa9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 POU3F1Q03052 451 aaPredicted RBP9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 MFSD13AQ14CX5 517 aa9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 TSTQ16762 297 aaKnown RBP9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 TRMT5Q32P41 509 aaKnown RBP9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 PDLIM3Q53GG5 364 aaPredicted RBP9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 AP1ARQ63HQ0 302 aa9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 JAZF1Q86VZ6 243 aa9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 RIBC1Q8N443 379 aaPredicted RBP9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 VPS37AQ8NEZ2 397 aa9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 TESCQ96BS2 214 aa9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 TMEM19Q96HH6 336 aa9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 BOD1Q96IK1 185 aa9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 MKS1Q9NXB0 559 aa9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 B3GNT2Q9NY97 397 aa9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 TAAR3PQ9P1P4 343 aa9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 FBXO9Q9UK97 447 aaPredicted RBP9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 SOX21Q9Y651 276 aaPredicted RBP9.99□□□□□ -0.81
NSMCE1-202ENST00000561960 IGKV1D-42A0A075B6H8 117 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 A0A0A6YYJ9 748 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 C11orf98E9PRG8 122 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 SLCO1B7G3V0H7 640 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 TPD52L2O43399 206 aaKnown RBP9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 VAMP5O95183 116 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 TFP02787 698 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 GUSBP08236 651 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 ZNF35P13682 527 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 NQO1P15559 274 aaKnown RBP9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 BGNP21810 368 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 HTR2AP28223 471 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 ABCE1P61221 599 aaKnown RBP9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 UBA52P62987 128 aaKnown RBP9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 MYBPC1Q00872 1141 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 GALK2Q01415 458 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 ZP4Q12836 540 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 GSTA3Q16772 222 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 C3orf36Q3SXR2 165 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 MIDNQ504T8 468 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 ZNF584Q8IVC4 421 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 ZNF440Q8IYI8 595 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 BCL6BQ8N143 479 aaPredicted RBP9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 SIGLECL1Q8N7X8 197 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 PIK3C3Q8NEB9 887 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 MFSD8Q8NHS3 518 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 MGARPQ8TDB4 240 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 SLC38A5Q8WUX1 472 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 ZFAND2BQ8WV99 257 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 ZNF75AQ96N20 296 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 OXGR1Q96P68 337 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 SORT1Q99523 831 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 SH3GL3Q99963 347 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 RBM4Q9BWF3 364 aaKnown RBP9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 WDR55Q9H6Y2 383 aaPredicted RBP9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 UBAP1Q9NZ09 502 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 P2RX2Q9UBL9 471 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 BTNL2Q9UIR0 455 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 POFUT2Q9Y2G5 429 aa9.98□□□□□ -0.81
NSMCE1-202ENST00000561960 IGHV3OR16-10A0A075B7F0 116 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 TRAV20A0A0B4J274 112 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 ISPDA4D126 451 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 MS4A18H0YCH9 400 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 RPL36A-HNRNPH2H7BZ11 118 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 AIM2O14862 343 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 RAB36O95755 333 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 KITP10721 976 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 LBPP18428 481 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 MVDP53602 400 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 DSTNP60981 165 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 RAB1AP62820 205 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 SRSF4Q08170 494 aaKnown RBP9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 IFFO1Q0D2I5 559 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 SMU1Q2TAY7 513 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 MS4A18Q3C1V0 323 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 SPRNQ5BIV9 151 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 SPATA46Q5T0L3 261 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 DCAF12L2Q5VW00 463 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 C1QL2Q7Z5L3 287 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 UEVLDQ8IX04 471 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 SKA3Q8IX90 412 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 C20orf196Q8IYI0 205 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 C10orf53Q8N6V4 93 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 OR6N1Q8NGY5 312 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 MOGAT1Q96PD6 335 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 ULBP2Q9BZM5 246 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 RPS6KB2Q9UBS0 482 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 RCE1Q9Y256 329 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 DSPPQ9NZW4 1301 aa9.97□□□□□ -0.81
NSMCE1-202ENST00000561960 A0A1B0GWA3 101 aa9.96□□□□□ -0.82
NSMCE1-202ENST00000561960 RFXANKO14593 260 aa9.96□□□□□ -0.82
NSMCE1-202ENST00000561960 DEAF1O75398 565 aaPredicted RBP9.96□□□□□ -0.82
NSMCE1-202ENST00000561960 PRSS23O95084 383 aa9.96□□□□□ -0.82
NSMCE1-202ENST00000561960 ANP32DO95626 131 aa9.96□□□□□ -0.82
NSMCE1-202ENST00000561960 BCL10O95999 233 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms