RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CDK4P11802 303 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 HK1P19367 917 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 TCN2P20062 427 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 IL11P20809 199 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 NR4A1P22736 598 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 GADD45AP24522 165 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 ITPKBP27987 946 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 IDUAP35475 653 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 TMED10P49755 219 aaKnown RBP5.89□□□□□ -1.47
CAPN3-210ENST00000561817 PRPS1P60891 318 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 ERVK-25P63136 954 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 RPL18Q07020 188 aaKnown RBP5.89□□□□□ -1.47
CAPN3-210ENST00000561817 SNTA1Q13424 505 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 DNASE1L3Q13609 305 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 TPBGQ13641 420 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 IL10RAQ13651 578 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 GGTLC2Q14390 218 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 SPHARQ15513 63 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 INPP5JQ15735 1006 aaPredicted RBP5.89□□□□□ -1.47
CAPN3-210ENST00000561817 PLPPR5Q32ZL2 321 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 LINC01590Q5TEZ4 76 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 FCRLBQ6BAA4 426 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 OR5M10Q6IEU7 315 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 ARHGAP11AQ6P4F7 1023 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 ARSKQ6UWY0 536 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 B3GLCTQ6Y288 498 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 SHFQ7M4L6 423 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 IGFN1Q86VF2 1251 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 P2RY8Q86VZ1 359 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 ZNF227Q86WZ6 799 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 SIRT6Q8N6T7 355 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 TMEM99Q8N816 258 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 CYB561A3Q8NBI2 242 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 ZNF563Q8TA94 476 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 ZPLD1Q8TCW7 415 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 DYNC2LI1Q8TCX1 351 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 PAQR8Q8TEZ7 354 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 RFKQ969G6 155 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 ERMAPQ96PL5 475 aaPredicted RBP5.89□□□□□ -1.47
CAPN3-210ENST00000561817 TEAD3Q99594 435 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 SCNM1Q9BWG6 230 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 MND1Q9BWT6 205 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 TEX12Q9BXU0 123 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 ANGPTL4Q9BY76 406 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 RACGAP1Q9H0H5 632 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 MRPL18Q9H0U6 180 aaKnown RBP5.89□□□□□ -1.47
CAPN3-210ENST00000561817 ADGRL4Q9HBW9 690 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 ISYNA1Q9NPH2 558 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 TAS2R5Q9NYW4 299 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 MED11Q9P086 117 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 SEC14L4Q9UDX3 406 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 WARS2Q9UGM6 360 aaKnown RBP5.89□□□□□ -1.47
CAPN3-210ENST00000561817 KLHL21Q9UJP4 597 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 YARS2Q9Y2Z4 477 aaKnown RBP5.89□□□□□ -1.47
CAPN3-210ENST00000561817 SLC6A5Q9Y345 797 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 EXOSC1Q9Y3B2 195 aaKnown RBP5.89□□□□□ -1.47
CAPN3-210ENST00000561817 SF3B6Q9Y3B4 125 aaKnown RBP5.89□□□□□ -1.47
CAPN3-210ENST00000561817 ADAM18Q9Y3Q7 739 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 IER3IP1Q9Y5U9 82 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 WIF1Q9Y5W5 379 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 PMF1-BGLAPU3KQ54 211 aa5.89□□□□□ -1.47
CAPN3-210ENST00000561817 OR6C68A6NDL8 312 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 SNTNA6NMZ2 147 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 RIIAD1A6NNX1 92 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 ZNF891A8MT65 544 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-210ENST00000561817 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-210ENST00000561817 PRR23D1E9PI22 279 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-210ENST00000561817 PLPP3O14495 311 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 SLC22A1O15245 554 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 ZNF208O43345 1280 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 GMFGO60234 142 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 RAD1O60671 282 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 GPX5O75715 221 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 TUSC2O75896 110 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 LALBAP00709 142 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 MT-ATP6P00846 226 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 IGHMP01871 453 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 SERPINA7P05543 415 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 ADRB1P08588 477 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 PRR23D2P0DMB1 279 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-210ENST00000561817 CCL3P10147 92 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 SFTPCP11686 197 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 ZNF182P17025 639 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-210ENST00000561817 ZNF3P17036 446 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 TNFSF4P23510 183 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 CXCR1P25024 350 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 OTX2P32243 289 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 UGT2B10P36537 528 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 TGFBR1P36897 503 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 APOBEC1P41238 236 aaKnown RBP5.88□□□□□ -1.47
CAPN3-210ENST00000561817 CDKN2AP42771 156 aaKnown RBP5.88□□□□□ -1.47
CAPN3-210ENST00000561817 CRYBB2P43320 205 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 RPS5P46782 204 aaKnown RBP5.88□□□□□ -1.47
CAPN3-210ENST00000561817 DIO1P49895 249 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 SLC25A1P53007 311 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 VBP1P61758 197 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 NCS1P62166 190 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 ZNF85Q03923 595 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.88□□□□□ -1.47
CAPN3-210ENST00000561817 ACSM1Q08AH1 577 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms