RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 GHRLQ9UBU3 117 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 ZNF346Q9UL40 294 aaKnown RBP2.96□□□□□ -1.94
HERC1-215ENST00000561436 KLHDC2Q9Y2U9 406 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 AP1M2Q9Y6Q5 423 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 HECTD1Q9ULT8 2610 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 LAMA5O15230 3695 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 MYH6P13533 1939 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 NOTCH3Q9UM47 2321 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 TRBV7-9A0A0J9YWB2 115 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 A0A1B0GVL5 298 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 RPL37AP8A6NKH3 93 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 ZNF487B1APH4 448 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 SHISA9B4DS77 424 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 PDLIM1O00151 329 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 NDC80O14777 642 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 LRRTM2O43300 516 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 SPAG6O75602 509 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 PALMO75781 387 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 MFN2O95140 757 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 PTBP3O95758 552 aaKnown RBP2.95□□□□□ -1.94
HERC1-215ENST00000561436 HEXBP07686 556 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 STSP08842 583 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 H2AFZP0C0S5 128 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 GSTT2P0CG29 244 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 GSTT2BP0CG30 244 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 CD1EP15812 388 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 H2AFXP16104 143 aaPredicted RBP2.95□□□□□ -1.94
HERC1-215ENST00000561436 NELFEP18615 380 aaKnown RBP2.95□□□□□ -1.94
HERC1-215ENST00000561436 IL4RP24394 825 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 CASP14P31944 242 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 ELK3P41970 407 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 GNPDA1P46926 289 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 HTR5AP47898 357 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 TRPC1P48995 793 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 UBE2IP63279 158 aaKnown RBP2.95□□□□□ -1.94
HERC1-215ENST00000561436 ZP4Q12836 540 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 EXOC3L4Q17RC7 722 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 PTPN20Q4JDL3 420 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 LCE3CQ5T5A8 94 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 RWDD4Q6NW29 188 aaKnown RBP2.95□□□□□ -1.94
HERC1-215ENST00000561436 SCYL2Q6P3W7 929 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 LEG1Q6P5S2 330 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 Q6ZS92 163 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 LRRC70Q7Z2Q7 622 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 RAB43Q86YS6 212 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 CCDC36Q8IYA8 594 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 ZADH2Q8N4Q0 377 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 ARFGAP2Q8N6H7 521 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 POM121L12Q8N7R1 296 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 OR4F17Q8NGA8 305 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 FLVCR1-AS1Q8TAF5 88 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 SLC25A36Q96CQ1 311 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 COX14Q96I36 57 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 VPS35Q96QK1 796 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 OR4F4Q96R69 305 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 LYSMD1Q96S90 227 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 GPA33Q99795 319 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 SOSTQ9BQB4 213 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 TTYH2Q9BSA4 534 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 CCDC28BQ9BUN5 200 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 CHRNA10Q9GZZ6 450 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 LPAR2Q9HBW0 351 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 TIGARQ9NQ88 270 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 FAM114A2Q9NRY5 505 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 C1orf123Q9NWV4 160 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 RDH8Q9NYR8 311 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 NEU3Q9UQ49 428 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 RNF24Q9Y225 148 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 EIF3LQ9Y262 564 aaKnown RBP2.95□□□□□ -1.94
HERC1-215ENST00000561436 FARSAQ9Y285 508 aaKnown RBP2.95□□□□□ -1.94
HERC1-215ENST00000561436 MYO9AB2RTY4 2548 aa2.95□□□□□ -1.94
HERC1-215ENST00000561436 URB1O60287 2271 aaKnown RBP2.95□□□□□ -1.94
HERC1-215ENST00000561436 TDRD15B5MCY1 1934 aaKnown RBP2.95□□□□□ -1.94
HERC1-215ENST00000561436 CNOT1A5YKK6 2376 aaKnown RBP2.95□□□□□ -1.94
HERC1-215ENST00000561436 MYH9P35579 1960 aaKnown RBP2.94□□□□□ -1.94
HERC1-215ENST00000561436 PLXND1Q9Y4D7 1925 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 WDFY3Q8IZQ1 3526 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 ITPR1Q14643 2758 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 IGHV3OR16-12A0A075B7B8 117 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 SYNJ2BP-COX16A0A087WUM0 186 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 GOLGA6L4A6NEF3 574 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 FBLL1A6NHQ2 334 aaKnown RBP2.94□□□□□ -1.94
HERC1-215ENST00000561436 SIGLEC16A6NMB1 481 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 WASHC1A8K0Z3 465 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 ERI2A8K979 691 aaKnown RBP2.94□□□□□ -1.94
HERC1-215ENST00000561436 H3BMH7 237 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 KMOO15229 486 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 TYROBPO43914 113 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 KIAA0754O94854 1291 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 AK1P00568 194 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 KRT6BP04259 564 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 CALB1P05937 261 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 CCDC172P0C7W6 258 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 ACADSP16219 412 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 TSPAN8P19075 237 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 FUT1P19526 365 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 PAICSP22234 425 aaKnown RBP2.94□□□□□ -1.94
HERC1-215ENST00000561436 F8A1P23610 371 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 SHC1P29353 583 aa2.94□□□□□ -1.94
HERC1-215ENST00000561436 HPDP32754 393 aaPredicted RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms