RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 H1FNTQ75WM6 255 aaPredicted RBP10.07□□□□□ -0.8
USP3-220ENST00000561381 MDP1Q86V88 176 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 TMEM123Q8N131 208 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 GPR137CQ8N3F9 429 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 SVOPLQ8N434 492 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 GOLGA6L1Q8N7Z2 621 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 FAM169BQ8N8A8 192 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 LSMEM1Q8N8F7 131 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 NUP37Q8NFH4 326 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 OR4F15Q8NGB8 312 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 SLC38A4Q969I6 547 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 TXNDC15Q96J42 360 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 DOK1Q99704 481 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 EBF4Q9BQW3 602 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 EMC6Q9BV81 110 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 RAD21L1Q9H4I0 556 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 IKZF5Q9H5V7 419 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 NOX3Q9HBY0 568 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 TMBIM4Q9HC24 238 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 SLC52A3Q9NQ40 469 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 VAPAQ9P0L0 249 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 KLHL14Q9P2G3 628 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 KCNS2Q9ULS6 477 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 SVEP1Q4LDE5 3571 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 TRAV36DV7A0A075B6V5 113 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 LRRN3E7EW58 273 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 OR2T1O43869 369 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 ZNF500O60304 480 aaPredicted RBP10.06□□□□□ -0.8
USP3-220ENST00000561381 TPST2O60704 377 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 STAMBPO95630 424 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 TGFAP01135 160 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 HLA-HP01893 362 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 ZNF23P17027 643 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 SRD5A1P18405 259 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 NPR2P20594 1047 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 PAX7P23759 505 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 AQP1P29972 269 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 IL2RGP31785 369 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 CAPZA2P47755 286 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 CDK6Q00534 326 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 MSMPQ1L6U9 139 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 C4orf48Q5BLP8 95 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 LRIF1Q5T3J3 769 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 REEP3Q6NUK4 255 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 DHRS4L2Q6PKH6 230 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 SPATA21Q7Z572 469 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 CDK20Q8IZL9 346 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 RNF217Q8TC41 542 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 MOGAT1Q96PD6 335 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 RAB1BQ9H0U4 201 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 ZNF442Q9H7R0 627 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 C12orf10Q9HB07 376 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 MYOZ1Q9NP98 299 aaPredicted RBP10.06□□□□□ -0.8
USP3-220ENST00000561381 SLCO1B3Q9NPD5 702 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 TCF7L2Q9NQB0 619 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 MED29Q9NX70 200 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 CCDC167Q9P0B6 97 aa10.06□□□□□ -0.8
USP3-220ENST00000561381 A0A087WUJ7 227 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 TRBV5-3A0A0A0MS03 114 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 LOC102725191A0A1B0GVB3 256 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 ZNF99A8MXY4 864 aaPredicted RBP10.05□□□□□ -0.8
USP3-220ENST00000561381 BGLAPP02818 100 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 DAOP14920 347 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 NQO1P15559 274 aaKnown RBP10.05□□□□□ -0.8
USP3-220ENST00000561381 ARR3P36575 388 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 MRPL19P49406 292 aaKnown RBP10.05□□□□□ -0.8
USP3-220ENST00000561381 IDH3AP50213 366 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 AQP5P55064 265 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 STX1BP61266 288 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 PIGFQ07326 219 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 OR1Q1Q15612 314 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 ADRM1Q16186 407 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 KRT80Q6KB66 452 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 ULK3Q6PHR2 472 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 NHLRC1Q6VVB1 395 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 UEVLDQ8IX04 471 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 C20orf196Q8IYI0 205 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 PIK3C3Q8NEB9 887 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 DNAJA4Q8WW22 397 aaPredicted RBP10.05□□□□□ -0.8
USP3-220ENST00000561381 CKAP2Q8WWK9 683 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 SPDL1Q96EA4 605 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 SLC41A3Q96GZ6 507 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 B3GNT2Q9NY97 397 aa10.05□□□□□ -0.8
USP3-220ENST00000561381 A0A0B4J2E0 115 aa10.04□□□□□ -0.8
USP3-220ENST00000561381 A0A1B0GX12 115 aa10.04□□□□□ -0.8
USP3-220ENST00000561381 LYNX1G3V0Z9 82 aa10.04□□□□□ -0.8
USP3-220ENST00000561381 POLR3GO15318 223 aaPredicted RBP10.04□□□□□ -0.8
USP3-220ENST00000561381 LILRA1O75019 489 aa10.04□□□□□ -0.8
USP3-220ENST00000561381 ADRA2AP08913 450 aa10.04□□□□□ -0.8
USP3-220ENST00000561381 LYNX1P0DP58 116 aa10.04□□□□□ -0.8
USP3-220ENST00000561381 CD79AP11912 226 aa10.04□□□□□ -0.8
USP3-220ENST00000561381 GIFP27352 417 aa10.04□□□□□ -0.8
USP3-220ENST00000561381 CDH12P55289 794 aa10.04□□□□□ -0.8
USP3-220ENST00000561381 RGS8P57771 180 aaPredicted RBP10.04□□□□□ -0.8
USP3-220ENST00000561381 POU3F1Q03052 451 aaPredicted RBP10.04□□□□□ -0.8
USP3-220ENST00000561381 SNTB2Q13425 540 aaKnown RBP10.04□□□□□ -0.8
USP3-220ENST00000561381 CAMK2DQ13557 499 aa10.04□□□□□ -0.8
USP3-220ENST00000561381 SCARB2Q14108 478 aa10.04□□□□□ -0.8
USP3-220ENST00000561381 DAG1Q14118 895 aa10.04□□□□□ -0.8
USP3-220ENST00000561381 TRIP10Q15642 601 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms