RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 THRBP10828 461 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 PCSK6P29122 969 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 TTKP33981 857 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 TAS2R41P59536 307 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 SELENOWP63302 87 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 PMS2P3Q13401 168 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 ANKK1Q8NFD2 765 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 OR6T1Q8NGN1 323 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 OR1K1Q8NGR3 316 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 VANGL1Q8TAA9 524 aaPredicted RBP13.94□□□□□ -0.18
LMX1B-204ENST00000561065 ZNF417Q8TAU3 575 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 TAMM41Q96BW9 452 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 TRMT61AQ96FX7 289 aaKnown RBP13.94□□□□□ -0.18
LMX1B-204ENST00000561065 BOD1Q96IK1 185 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 ZNF587Q96SQ5 575 aaPredicted RBP13.94□□□□□ -0.18
LMX1B-204ENST00000561065 DHRS9Q9BPW9 319 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 CACNG6Q9BXT2 260 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 PCDHAC1Q9H158 963 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 ALG2Q9H553 416 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 B3GAT2Q9NPZ5 323 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 NOX1Q9Y5S8 564 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 ABCA1O95477 2261 aa13.94□□□□□ -0.18
LMX1B-204ENST00000561065 CPSF4LA6NMK7 179 aaKnown RBP13.93□□□□□ -0.18
LMX1B-204ENST00000561065 ZNF726A6NNF4 738 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 TRAF3IP2O43734 574 aaPredicted RBP13.93□□□□□ -0.18
LMX1B-204ENST00000561065 SLC43A1O75387 559 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 HOXB1P14653 301 aaPredicted RBP13.93□□□□□ -0.18
LMX1B-204ENST00000561065 DRD4P21917 467 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 CBLP22681 906 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 GRPRP30550 384 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 NUDT2P50583 147 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 SH3BGRP55822 239 aaPredicted RBP13.93□□□□□ -0.18
LMX1B-204ENST00000561065 CLDN17P56750 224 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 PRPS1P60891 318 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 TUBA1BP68363 451 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 TUBA4AP68366 448 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 LIPEQ05469 1076 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 ETFDHQ16134 617 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 TBRG1Q3YBR2 411 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 LRRC23Q53EV4 343 aaPredicted RBP13.93□□□□□ -0.18
LMX1B-204ENST00000561065 CYBRD1Q53TN4 286 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 HMBOX1Q6NT76 420 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 TUBA1AQ71U36 451 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 CARM1Q86X55 608 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 WDFY1Q8IWB7 410 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 UEVLDQ8IX04 471 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 SLC15A3Q8IY34 581 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 PIK3C3Q8NEB9 887 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 GPR32P1Q8NGA4 272 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 HTRA1Q92743 480 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 TPD52L3Q96J77 140 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 SEC61A2Q9H9S3 476 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 OBP2BQ9NPH6 170 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 FAIMQ9NVQ4 179 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 MRPL39Q9NYK5 338 aaKnown RBP13.93□□□□□ -0.18
LMX1B-204ENST00000561065 POU2F3Q9UKI9 436 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 JMJD1CQ15652 2540 aa13.93□□□□□ -0.18
LMX1B-204ENST00000561065 IGHV1-18A0A0C4DH31 117 aa13.92□□□□□ -0.18
LMX1B-204ENST00000561065 ENTPD5O75356 428 aa13.92□□□□□ -0.18
LMX1B-204ENST00000561065 OR5F1O95221 314 aa13.92□□□□□ -0.18
LMX1B-204ENST00000561065 HPRP00739 348 aa13.92□□□□□ -0.18
LMX1B-204ENST00000561065 RBM34P42696 430 aaKnown RBP13.92□□□□□ -0.18
LMX1B-204ENST00000561065 AGAP6Q5VW22 663 aa13.92□□□□□ -0.18
LMX1B-204ENST00000561065 LINC00114Q6XXX2 140 aa13.92□□□□□ -0.18
LMX1B-204ENST00000561065 MYPOPQ86VE0 399 aaPredicted RBP13.92□□□□□ -0.18
LMX1B-204ENST00000561065 TSPYL5Q86VY4 417 aaPredicted RBP13.92□□□□□ -0.18
LMX1B-204ENST00000561065 MUC15Q8N387 334 aa13.92□□□□□ -0.18
LMX1B-204ENST00000561065 GPR137CQ8N3F9 429 aa13.92□□□□□ -0.18
LMX1B-204ENST00000561065 OR4D11Q8NGI4 311 aa13.92□□□□□ -0.18
LMX1B-204ENST00000561065 BCL2L2Q92843 193 aaPredicted RBP13.92□□□□□ -0.18
LMX1B-204ENST00000561065 ZNF837Q96EG3 531 aaPredicted RBP13.92□□□□□ -0.18
LMX1B-204ENST00000561065 KCTD14Q9BQ13 255 aaPredicted RBP13.92□□□□□ -0.18
LMX1B-204ENST00000561065 LINC00470Q9BZP3 86 aa13.92□□□□□ -0.18
LMX1B-204ENST00000561065 MYLK2Q9H1R3 596 aa13.92□□□□□ -0.18
LMX1B-204ENST00000561065 SPAG4Q9NPE6 437 aa13.92□□□□□ -0.18
LMX1B-204ENST00000561065 NANSQ9NR45 359 aa13.92□□□□□ -0.18
LMX1B-204ENST00000561065 CBLN4Q9NTU7 201 aa13.92□□□□□ -0.18
LMX1B-204ENST00000561065 YLPM1P49750 1951 aaKnown RBP13.92□□□□□ -0.18
LMX1B-204ENST00000561065 A0A096LNT2 108 aa13.91□□□□□ -0.18
LMX1B-204ENST00000561065 ZNF503-AS2A6NEH8 195 aa13.91□□□□□ -0.18
LMX1B-204ENST00000561065 LRRN3E7EW58 273 aa13.91□□□□□ -0.18
LMX1B-204ENST00000561065 BGLAPP02818 100 aa13.91□□□□□ -0.18
LMX1B-204ENST00000561065 AHCYP23526 432 aa13.91□□□□□ -0.18
LMX1B-204ENST00000561065 CRYBA2P53672 197 aa13.91□□□□□ -0.18
LMX1B-204ENST00000561065 PUDPQ08623 228 aa13.91□□□□□ -0.18
LMX1B-204ENST00000561065 ST3GAL3Q11203 375 aa13.91□□□□□ -0.18
LMX1B-204ENST00000561065 FKBP9P1Q75LS8 142 aa13.91□□□□□ -0.18
LMX1B-204ENST00000561065 PXKQ7Z7A4 578 aa13.91□□□□□ -0.18
LMX1B-204ENST00000561065 PRIMA1Q86XR5 153 aa13.91□□□□□ -0.18
LMX1B-204ENST00000561065 CCDC36Q8IYA8 594 aa13.91□□□□□ -0.18
LMX1B-204ENST00000561065 TMEM123Q8N131 208 aa13.91□□□□□ -0.18
LMX1B-204ENST00000561065 OR5J2Q8NH18 312 aa13.91□□□□□ -0.18
LMX1B-204ENST00000561065 SLC41A3Q96GZ6 507 aa13.91□□□□□ -0.18
LMX1B-204ENST00000561065 MOGAT1Q96PD6 335 aa13.91□□□□□ -0.18
LMX1B-204ENST00000561065 REG4Q9BYZ8 158 aa13.91□□□□□ -0.18
LMX1B-204ENST00000561065 FKRPQ9H9S5 495 aa13.91□□□□□ -0.18
LMX1B-204ENST00000561065 RPS6KA6Q9UK32 745 aa13.91□□□□□ -0.18
LMX1B-204ENST00000561065 SLC7A7Q9UM01 511 aa13.91□□□□□ -0.18
LMX1B-204ENST00000561065 MOKQ9UQ07 419 aa13.91□□□□□ -0.18
LMX1B-204ENST00000561065 CHD3Q12873 2000 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms