RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 CDC73Q6P1J9 531 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 SFXN4Q6P4A7 337 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 ZNF836Q6ZNA1 936 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 IDO2Q6ZQW0 420 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 MBOAT2Q6ZWT7 520 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 FAM57BQ71RH2 274 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 BTN2A1Q7KYR7 527 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 GET4Q7L5D6 327 aaPredicted RBP2.24□□□□□ -2.05
SPG11-223ENST00000560858 SHFQ7M4L6 423 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 OLIG3Q7RTU3 272 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 TRMT11Q7Z4G4 463 aaKnown RBP2.24□□□□□ -2.05
SPG11-223ENST00000560858 HDDC2Q7Z4H3 204 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 ADGRD2Q7Z7M1 963 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 LRRTM4Q86VH4 590 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 VRK2Q86Y07 508 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 KLBQ86Z14 1044 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 NKAIN4Q8IVV8 208 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 GPALPP1Q8IXQ4 340 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 CFAP206Q8IYR0 622 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 ELMOD2Q8IZ81 293 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 OR2L13Q8N349 312 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 HDDC3Q8N4P3 179 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 ACBD7Q8N6N7 88 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 ZFP41Q8N8Y5 198 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 AMER3Q8N944 861 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 LINC01555Q8NAE3 123 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 SLC37A3Q8NCC5 494 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 C19orf18Q8NEA5 215 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 BBS1Q8NFJ9 593 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 OR2T33Q8NG76 320 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 OR2L5Q8NG80 312 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 OR4F15Q8NGB8 312 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 OR11H7Q8NGC8 314 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 OR52L1Q8NGH7 329 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 OR2A1Q8NGT9 310 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 OR5H6Q8NGV6 325 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 OR51Q1Q8NH59 317 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 SUN5Q8TC36 379 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 FANK1Q8TC84 345 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 SLC2A12Q8TD20 617 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 SMIM4Q8WVI0 70 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 DEDD2Q8WXF8 326 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 ADAMTS14Q8WXS8 1223 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 SORCS1Q8WY21 1168 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 OR8D1Q8WZ84 308 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 TFGQ92734 400 aaPredicted RBP2.24□□□□□ -2.05
SPG11-223ENST00000560858 SNAPC3Q92966 411 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 YIPF5Q969M3 257 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 TMEM203Q969S6 136 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 RAB7BQ96AH8 199 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 FAM131CQ96AQ9 280 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 OTULINQ96BN8 352 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 MS4A6EQ96DS6 147 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 TCEAL4Q96EI5 215 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 C1GALT1C1Q96EU7 318 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 CNRIP1Q96F85 164 aaPredicted RBP2.24□□□□□ -2.05
SPG11-223ENST00000560858 OTUB1Q96FW1 271 aaPredicted RBP2.24□□□□□ -2.05
SPG11-223ENST00000560858 SLC41A3Q96GZ6 507 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 CMTM3Q96MX0 182 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 ZNF681Q96N22 645 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 MS4A4EQ96PG1 132 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 OR7D2Q96RA2 312 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 SECISBP2Q96T21 854 aaKnown RBP2.24□□□□□ -2.05
SPG11-223ENST00000560858 PRSS27Q9BQR3 290 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 UTP23Q9BRU9 249 aaKnown RBP2.24□□□□□ -2.05
SPG11-223ENST00000560858 TIMM29Q9BSF4 260 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 ZNF426Q9BUY5 554 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 SCNM1Q9BWG6 230 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 TEX12Q9BXU0 123 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 HDHD5Q9BXW7 423 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 ZNF350Q9GZX5 532 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 OR52D1Q9H346 318 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 UBQLN3Q9H347 655 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 DPAGT1Q9H3H5 408 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 RANBP3Q9H6Z4 567 aaPredicted RBP2.24□□□□□ -2.05
SPG11-223ENST00000560858 TRIM45Q9H8W5 580 aaPredicted RBP2.24□□□□□ -2.05
SPG11-223ENST00000560858 C12orf10Q9HB07 376 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 PLEKHA1Q9HB21 404 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 KRCC1Q9NPI7 259 aaPredicted RBP2.24□□□□□ -2.05
SPG11-223ENST00000560858 TRIM36Q9NQ86 728 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 CMC2Q9NRP2 79 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 NUDT15Q9NV35 164 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 C14orf105Q9NVL8 296 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 HIF1ANQ9NWT6 349 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 HCFC1R1Q9NWW0 138 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 HAO2Q9NYQ3 351 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 COMMD3Q9UBI1 195 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 RABL2AQ9UBK7 228 aaPredicted RBP2.24□□□□□ -2.05
SPG11-223ENST00000560858 MGAT4CQ9UBM8 478 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 TRPC4Q9UBN4 977 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 EXTL2Q9UBQ6 330 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 MALT1Q9UDY8 824 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 SLC23A2Q9UGH3 650 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 IL20RAQ9UHF4 553 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 CES1P1Q9UKY3 287 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 PLAGL1Q9UM63 463 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 RABL2BQ9UNT1 228 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 SATB2Q9UPW6 733 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 BAIAP2Q9UQB8 552 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 SIGLEC7Q9Y286 467 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms