RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 RNF212BA8MTL3 300 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 ANGPT2O15123 496 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 TPST1O60507 370 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 FMO6PO60774 539 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 MT-ATP6P00846 226 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 C8BP07358 591 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 NPR2P20594 1047 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 CBLP22681 906 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 AQP1P29972 269 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 NR4A2P43354 598 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 IDH3GP51553 393 aaPredicted RBP10.65□□□□□ -0.7
SPG11-219ENST00000559822 POU3F1Q03052 451 aaPredicted RBP10.65□□□□□ -0.7
SPG11-219ENST00000559822 PUDPQ08623 228 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 PMS2P3Q13401 168 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 GGTLC2Q14390 218 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 CARTPTQ16568 116 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 CYP51A1Q16850 503 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 GLIPR1L2Q4G1C9 344 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 ZNF613Q6PF04 617 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 SLC30A8Q8IWU4 369 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 TMEM123Q8N131 208 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 C10orf111Q8N326 155 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 C10orf53Q8N6V4 93 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 TMEM158Q8WZ71 300 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 SHARPINQ9H0F6 387 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 INTS9Q9NV88 658 aaKnown RBP10.65□□□□□ -0.7
SPG11-219ENST00000559822 MRPL39Q9NYK5 338 aaKnown RBP10.65□□□□□ -0.7
SPG11-219ENST00000559822 NDUFAF1Q9Y375 327 aa10.65□□□□□ -0.7
SPG11-219ENST00000559822 VWC2LB2RUY7 222 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 MS4A18H0YCH9 400 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 hCG_2039718K7EN88 272 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 M0R3G1 203 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 CHP2O43745 196 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 ENTPD5O75356 428 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 LY6HO94772 140 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 MFN2O95140 757 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 BGLAPP02818 100 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 IGHV4-31P0DP07 118 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 APEHP13798 732 aaKnown RBP10.64□□□□□ -0.71
SPG11-219ENST00000559822 ZNF16P17020 682 aaPredicted RBP10.64□□□□□ -0.71
SPG11-219ENST00000559822 CALCRP30988 508 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 CDH12P55289 794 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 NPRL3Q12980 569 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 ADRM1Q16186 407 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 MS4A18Q3C1V0 323 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 RUNDC3AQ59EK9 446 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 FAM166AQ6J272 317 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 PXKQ7Z7A4 578 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 DHDDSQ86SQ9 333 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 MDP1Q86V88 176 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 COMTD1Q86VU5 262 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 C20orf196Q8IYI0 205 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 DPP10Q8N608 796 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 OR6N1Q8NGY5 312 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 NEU4Q8WWR8 484 aaPredicted RBP10.64□□□□□ -0.71
SPG11-219ENST00000559822 MCHR1Q99705 422 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 CPPED1Q9BRF8 314 aaPredicted RBP10.64□□□□□ -0.71
SPG11-219ENST00000559822 SIKE1Q9BRV8 207 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 PRR14Q9BWN1 585 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 ULBP2Q9BZM5 246 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 IKZF5Q9H5V7 419 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 DENND2DQ9H6A0 471 aaPredicted RBP10.64□□□□□ -0.71
SPG11-219ENST00000559822 FBXL3Q9UKT7 428 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 KCNS2Q9ULS6 477 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 POFUT2Q9Y2G5 429 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 SPEF1Q9Y4P9 236 aa10.64□□□□□ -0.71
SPG11-219ENST00000559822 IGHV2OR16-5A0A0B4J2B6 119 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 SLC35F4A4IF30 521 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 HMGB1P1B2RPK0 211 aaPredicted RBP10.63□□□□□ -0.71
SPG11-219ENST00000559822 LMX1BO60663 402 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 OR6A2O95222 327 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 HPRP00739 348 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 CELA3BP08861 270 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 HNF1AP20823 631 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 AHCYP23526 432 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 DAG1Q14118 895 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 GSG1Q2KHT4 349 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 IQCCQ4KMZ1 466 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 INTS11Q5TA45 600 aaKnown RBP10.63□□□□□ -0.71
SPG11-219ENST00000559822 CARD17Q5XLA6 110 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 DLEU7Q6UYE1 221 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 ZNF813Q6ZN06 617 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 ZNF627Q7L945 461 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 SPATA21Q7Z572 469 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 PATL1Q86TB9 770 aaKnown RBP10.63□□□□□ -0.71
SPG11-219ENST00000559822 ANKS4BQ8N8V4 417 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 SMYD1Q8NB12 490 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 OR5J2Q8NH18 312 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 TSPEARQ8WU66 669 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 RASSF5Q8WWW0 418 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 MAGEB18Q96M61 343 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 CGREF1Q99674 301 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 RSPO3Q9BXY4 272 aaPredicted RBP10.63□□□□□ -0.71
SPG11-219ENST00000559822 SEC61A2Q9H9S3 476 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 DYNLRB1Q9NP97 96 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 RTTNQ86VV8 2226 aa10.63□□□□□ -0.71
SPG11-219ENST00000559822 LOC100289279A0A1B0GTE1 492 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 M0QX08 132 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 PLPP3O14495 311 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 SEC14L2O76054 403 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms