RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 ISG20L2Q9H9L3 353 aaKnown RBP11.42□□□□□ -0.58
USP3-213ENST00000559711 CHST11Q9NPF2 352 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 SACM1LQ9NTJ5 587 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 STMN3Q9NZ72 180 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 B3GALT5Q9Y2C3 310 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 PMF1-BGLAPU3KQ54 211 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 PCNX3Q9H6A9 2034 aa11.42□□□□□ -0.58
USP3-213ENST00000559711 H3BML4 177 aa11.41□□□□□ -0.58
USP3-213ENST00000559711 XKRYO14609 159 aa11.41□□□□□ -0.58
USP3-213ENST00000559711 ZIC3O60481 467 aa11.41□□□□□ -0.58
USP3-213ENST00000559711 SERPINI2O75830 405 aa11.41□□□□□ -0.58
USP3-213ENST00000559711 MT-ND5P03915 603 aa11.41□□□□□ -0.58
USP3-213ENST00000559711 P04436 131 aa11.41□□□□□ -0.58
USP3-213ENST00000559711 INHBBP09529 407 aa11.41□□□□□ -0.58
USP3-213ENST00000559711 CEACAM1P13688 526 aa11.41□□□□□ -0.58
USP3-213ENST00000559711 GABRA5P31644 462 aa11.41□□□□□ -0.58
USP3-213ENST00000559711 ACVR1BP36896 505 aa11.41□□□□□ -0.58
USP3-213ENST00000559711 CYB561P49447 251 aa11.41□□□□□ -0.58
USP3-213ENST00000559711 MOGQ16653 247 aa11.41□□□□□ -0.58
USP3-213ENST00000559711 GLYR1Q49A26 553 aaPredicted RBP11.41□□□□□ -0.58
USP3-213ENST00000559711 EEF1A1P5Q5VTE0 462 aa11.41□□□□□ -0.58
USP3-213ENST00000559711 CD200R1LQ6Q8B3 271 aa11.41□□□□□ -0.58
USP3-213ENST00000559711 BEST3Q8N1M1 668 aa11.41□□□□□ -0.58
USP3-213ENST00000559711 ADPRHL1Q8NDY3 354 aa11.41□□□□□ -0.58
USP3-213ENST00000559711 TSSK2Q96PF2 358 aa11.41□□□□□ -0.58
USP3-213ENST00000559711 SLIRPQ9GZT3 109 aaKnown RBP11.41□□□□□ -0.58
USP3-213ENST00000559711 SIAEQ9HAT2 523 aa11.41□□□□□ -0.58
USP3-213ENST00000559711 VSX1Q9NZR4 365 aaPredicted RBP11.41□□□□□ -0.58
USP3-213ENST00000559711 TEKT2Q9UIF3 430 aa11.41□□□□□ -0.58
USP3-213ENST00000559711 SSR3Q9UNL2 185 aa11.41□□□□□ -0.58
USP3-213ENST00000559711 HDGFL3Q9Y3E1 203 aa11.41□□□□□ -0.58
USP3-213ENST00000559711 A0A1W2PRG6 482 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 PRSS37A4D1T9 235 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 DCTN6O00399 190 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 ARHGEF9O43307 516 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 GTF2E2P29084 291 aaKnown RBP11.4□□□□□ -0.58
USP3-213ENST00000559711 PYCR1P32322 319 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 SERPINB10P48595 397 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 TLE3Q04726 772 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 AIMP2Q13155 320 aaKnown RBP11.4□□□□□ -0.58
USP3-213ENST00000559711 ZNF239Q16600 458 aaKnown RBP11.4□□□□□ -0.58
USP3-213ENST00000559711 NHLRC1Q6VVB1 395 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 PXKQ7Z7A4 578 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 ZBTB46Q86UZ6 589 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 KLBQ86Z14 1044 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 SLC35F2Q8IXU6 374 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 OR6V1Q8N148 313 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 SYS1Q8N2H4 156 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 OR5M1Q8NGP8 315 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 OR6K6Q8NGW6 343 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 SMAP2Q8WU79 429 aaPredicted RBP11.4□□□□□ -0.58
USP3-213ENST00000559711 ADAMTS14Q8WXS8 1223 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 RELTQ969Z4 430 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 TRMT61AQ96FX7 289 aaKnown RBP11.4□□□□□ -0.58
USP3-213ENST00000559711 SYT4Q9H2B2 425 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 SRA1Q9HD15 236 aaKnown RBP11.4□□□□□ -0.58
USP3-213ENST00000559711 ASCL3Q9NQ33 180 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 ANKRD10Q9NXR5 420 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 ZMIZ1Q9ULJ6 1067 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 TRAPPC4Q9Y296 219 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 FKBP7Q9Y680 259 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 MUC6Q6W4X9 2439 aa11.4□□□□□ -0.58
USP3-213ENST00000559711 ZFHX2Q9C0A1 2572 aaPredicted RBP11.4□□□□□ -0.58
USP3-213ENST00000559711 A0A1W2PNV4 684 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 PROB1E7EW31 1015 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 G3V3Y1 287 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 H7C1C5 153 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 SLC30A4O14863 429 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 SELENOFO60613 162 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 PLGP00747 810 aaPredicted RBP11.4□□□□□ -0.59
USP3-213ENST00000559711 HLA-DOBP13765 273 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 ZNF17P17021 662 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 CELP19835 753 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 NAA10P41227 235 aaPredicted RBP11.4□□□□□ -0.59
USP3-213ENST00000559711 P2RY4P51582 365 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 HCCSP53701 268 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 LCN6P62502 163 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 RPS25P62851 125 aaKnown RBP11.4□□□□□ -0.59
USP3-213ENST00000559711 HSF2Q03933 536 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 VASNQ6EMK4 673 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 VASH1Q7L8A9 365 aaPredicted RBP11.4□□□□□ -0.59
USP3-213ENST00000559711 SSX6Q7RTT6 188 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 EGFL6Q8IUX8 553 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 TIGD4Q8IY51 512 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 PM20D2Q8IYS1 436 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 FER1L6-AS2Q96M78 137 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 UBL7Q96S82 380 aaPredicted RBP11.4□□□□□ -0.59
USP3-213ENST00000559711 COQ7Q99807 217 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 NXF2Q9GZY0 626 aaKnown RBP11.4□□□□□ -0.59
USP3-213ENST00000559711 MARCH7Q9H992 704 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 EXOSC4Q9NPD3 245 aaKnown RBP11.4□□□□□ -0.59
USP3-213ENST00000559711 TRIM36Q9NQ86 728 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 CCDC59Q9P031 241 aaKnown RBP11.4□□□□□ -0.59
USP3-213ENST00000559711 A3GALT2U3KPV4 340 aa11.4□□□□□ -0.59
USP3-213ENST00000559711 TRDV1A0A1B0GX56 115 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 SLC22A23A1A5C7 686 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 A6NIZ1 184 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 FAM171A2A8MVW0 826 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 ZNF670-ZNF695F2Z2N8 137 aa11.39□□□□□ -0.59
USP3-213ENST00000559711 CDK2AP1O14519 115 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms