RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 CARD17Q5XLA6 110 aa7.58□□□□□ -1.2
SNRPA1-208ENST00000559686 PARP8Q8N3A8 854 aa7.58□□□□□ -1.2
SNRPA1-208ENST00000559686 OR52E2Q8NGJ4 325 aa7.58□□□□□ -1.2
SNRPA1-208ENST00000559686 OR2T11Q8NH01 316 aa7.58□□□□□ -1.2
SNRPA1-208ENST00000559686 DCAKDQ8WVC6 231 aa7.58□□□□□ -1.2
SNRPA1-208ENST00000559686 ZG16BQ96DA0 208 aa7.58□□□□□ -1.2
SNRPA1-208ENST00000559686 L3HYPDHQ96EM0 354 aa7.58□□□□□ -1.2
SNRPA1-208ENST00000559686 SLC35G5Q96KT7 338 aa7.58□□□□□ -1.2
SNRPA1-208ENST00000559686 PAFAH2Q99487 392 aa7.58□□□□□ -1.2
SNRPA1-208ENST00000559686 PRPF18Q99633 342 aaKnown RBP7.58□□□□□ -1.2
SNRPA1-208ENST00000559686 PAIP2Q9BPZ3 127 aaKnown RBP7.58□□□□□ -1.2
SNRPA1-208ENST00000559686 TAPBPLQ9BX59 468 aa7.58□□□□□ -1.2
SNRPA1-208ENST00000559686 LINC00470Q9BZP3 86 aa7.58□□□□□ -1.2
SNRPA1-208ENST00000559686 ACSS3Q9H6R3 686 aa7.58□□□□□ -1.2
SNRPA1-208ENST00000559686 NINJ2Q9NZG7 142 aa7.58□□□□□ -1.2
SNRPA1-208ENST00000559686 GIMAP2Q9UG22 337 aa7.58□□□□□ -1.2
SNRPA1-208ENST00000559686 WDR45Q9Y484 360 aa7.58□□□□□ -1.2
SNRPA1-208ENST00000559686 RNF114Q9Y508 228 aa7.58□□□□□ -1.2
SNRPA1-208ENST00000559686 SLC43A1O75387 559 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 NGFP01138 241 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 LCKP06239 509 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 SBK2P0C263 348 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 LINC00032P0C843 101 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 PATE4P0C8F1 98 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 OR12D1P0DN82 309 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 CCL2P13500 99 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 ZNF14P17017 642 aaPredicted RBP7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 HTR3AP46098 478 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 SERPINB9P50453 376 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 KCNJ10P78508 379 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 PLAURQ03405 335 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 RAB39AQ14964 217 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 FXNQ16595 210 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 DEFB112Q30KQ8 113 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 GPAT3Q53EU6 434 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 PHYHD1Q5SRE7 291 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 ATG16L1Q676U5 607 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 TYW3Q6IPR3 259 aaKnown RBP7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 RGS7BPQ6MZT1 257 aaPredicted RBP7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 C11orf87Q6NUJ2 197 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 LYPD4Q6UWN0 246 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 BRD3OSQ6XYD6 125 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 ZNF813Q6ZN06 617 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 C6orf120Q7Z4R8 191 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 R3HCC1LQ7Z5L2 792 aaKnown RBP7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 THNSL2Q86YJ6 484 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 SLC22A9Q8IVM8 553 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 CADM2Q8N3J6 435 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 BHLHE22Q8NFJ8 381 aaPredicted RBP7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 SFXN5Q8TD22 340 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 XAGE5Q8WWM1 108 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 SLC25A36Q96CQ1 311 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 ZNF764Q96H86 408 aaPredicted RBP7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 DCLRE1CQ96SD1 692 aaKnown RBP7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 ZNF350Q9GZX5 532 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 OR51I1Q9H343 314 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 SAP30LQ9HAJ7 183 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 B3GNT2Q9NY97 397 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 ASH2LQ9UBL3 628 aa7.57□□□□□ -1.2
SNRPA1-208ENST00000559686 COL7A1Q02388 2944 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 TRAV40A0A0B4J280 105 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 RNF103-CHMP3A0A140T963 221 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 LOC100653049A0A140TA62 436 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 SPRY3O43610 288 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 TRAF3IP2O43734 574 aaPredicted RBP7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 KRT34O76011 436 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 RAB36O95755 333 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 CSF1P09603 554 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 OR8G3PP0DMU2 310 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 B4GALT1P15291 398 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 ZNF12P17014 697 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 ZNF43P17038 809 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 LSP1P33241 339 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 GIPRP48546 466 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 P2RY4P51582 365 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 KLF3P57682 345 aaPredicted RBP7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 LOXL3P58215 753 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 SELENOVP59797 346 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 RAB1AP62820 205 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 CAV1Q03135 178 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 CHI3L2Q15782 390 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 PCGF3Q3KNV8 242 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 LSM12Q3MHD2 195 aaKnown RBP7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 ZNF362Q5T0B9 420 aaPredicted RBP7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 TNFAIP8L2Q6P589 184 aaPredicted RBP7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 KRTCAP2Q8N6L1 136 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 ANKRD42Q8N9B4 389 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 SYNPRQ8TBG9 265 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 ROPN1LQ96C74 230 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 MTERF3Q96E29 417 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 FCRL1Q96LA6 429 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 MYCBPQ99417 103 aaPredicted RBP7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 SLC30A2Q9BRI3 323 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 CHIAQ9BZP6 476 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 NPHS2Q9NP85 383 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 SLC6A13Q9NSD5 602 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 EXD2Q9NVH0 621 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 DCAF16Q9NXF7 216 aa7.56□□□□□ -1.2
SNRPA1-208ENST00000559686 SLC7A8Q9UHI5 535 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms