RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 ZNF627Q7L945 461 aa11.29□□□□□ -0.6
TPM1-220ENST00000559556 NET1Q7Z628 596 aaPredicted RBP11.29□□□□□ -0.6
TPM1-220ENST00000559556 OR9I1Q8NGQ6 314 aa11.29□□□□□ -0.6
TPM1-220ENST00000559556 DNAJA4Q8WW22 397 aaPredicted RBP11.29□□□□□ -0.6
TPM1-220ENST00000559556 GTF2H4Q92759 462 aa11.29□□□□□ -0.6
TPM1-220ENST00000559556 MAL2Q969L2 176 aa11.29□□□□□ -0.6
TPM1-220ENST00000559556 MRPL24Q96A35 216 aaKnown RBP11.29□□□□□ -0.6
TPM1-220ENST00000559556 LRR1Q96L50 414 aa11.29□□□□□ -0.6
TPM1-220ENST00000559556 ZNF75AQ96N20 296 aa11.29□□□□□ -0.6
TPM1-220ENST00000559556 PAIP1Q9H074 479 aaKnown RBP11.29□□□□□ -0.6
TPM1-220ENST00000559556 CENPHQ9H3R5 247 aa11.29□□□□□ -0.6
TPM1-220ENST00000559556 RAD21L1Q9H4I0 556 aa11.29□□□□□ -0.6
TPM1-220ENST00000559556 KLHL14Q9P2G3 628 aa11.29□□□□□ -0.6
TPM1-220ENST00000559556 RPS6KB2Q9UBS0 482 aa11.29□□□□□ -0.6
TPM1-220ENST00000559556 TRAV36DV7A0A075B6V5 113 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 SH3PXD2BA1X283 911 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 M0R233 179 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 CLIC1O00299 241 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 HPRP00739 348 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 ADRA2AP08913 450 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 KITP10721 976 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 ZNF14P17017 642 aaPredicted RBP11.28□□□□□ -0.6
TPM1-220ENST00000559556 PCMT1P22061 227 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 PRKAR1BP31321 381 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 SRP14P37108 136 aaKnown RBP11.28□□□□□ -0.6
TPM1-220ENST00000559556 CAPZA2P47755 286 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 MFSD13AQ14CX5 517 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 MSMPQ1L6U9 139 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 GSG1Q2KHT4 349 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 ALG10BQ5I7T1 473 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 FAM91A1Q658Y4 838 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 MAVSQ7Z434 540 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 COMTD1Q86VU5 262 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 UEVLDQ8IX04 471 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 C20orf196Q8IYI0 205 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 ANKRD42Q8N9B4 389 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 OR6S1Q8NH40 331 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 SLC41A3Q96GZ6 507 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 MRPL37Q9BZE1 423 aaKnown RBP11.28□□□□□ -0.6
TPM1-220ENST00000559556 TPK1Q9H3S4 243 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 ZNF224Q9NZL3 707 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 TESQ9UGI8 421 aaKnown RBP11.28□□□□□ -0.6
TPM1-220ENST00000559556 CORINQ9Y5Q5 1042 aa11.28□□□□□ -0.6
TPM1-220ENST00000559556 TMEM120BA0PK00 339 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 B4DSR2 109 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 LYNX1G3V0Z9 82 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 MS4A18H0YCH9 400 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 M0R3G1 203 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 HLA-HP01893 362 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 LYNX1P0DP58 116 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 ARAFP10398 606 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 ZNF35P13682 527 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 IL1RL1Q01638 556 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 CCNIQ14094 377 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 MS4A18Q3C1V0 323 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 ELFN2Q5R3F8 820 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 ULK3Q6PHR2 472 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 DHRS4L2Q6PKH6 230 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 NHLRC1Q6VVB1 395 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 DEF8Q6ZN54 512 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 CROCCP2Q86T23 111 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 MIER2Q8N344 545 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 GOLGA6L1Q8N7Z2 621 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 SCAIQ8N9R8 606 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 MS4A3Q96HJ5 214 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 OR52B2Q96RD2 323 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 DENND2DQ9H6A0 471 aaPredicted RBP11.27□□□□□ -0.61
TPM1-220ENST00000559556 B3GAT2Q9NPZ5 323 aa11.27□□□□□ -0.61
TPM1-220ENST00000559556 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.27□□□□□ -0.61
TPM1-220ENST00000559556 V9GYY5 206 aaPredicted RBP11.27□□□□□ -0.61
TPM1-220ENST00000559556 A0A087WUJ7 227 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 C5orf58C9J3I9 102 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 UBDO15205 165 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 BGLAPP02818 100 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 CD79AP11912 226 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 HLA-DOBP13765 273 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 NQO1P15559 274 aaKnown RBP11.26□□□□□ -0.61
TPM1-220ENST00000559556 GLRXP35754 106 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 MRPL19P49406 292 aaKnown RBP11.26□□□□□ -0.61
TPM1-220ENST00000559556 NCALDP61601 193 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 RPS23P62266 143 aaKnown RBP11.26□□□□□ -0.61
TPM1-220ENST00000559556 PUDPQ08623 228 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 FXNQ16595 210 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 TRMT5Q32P41 509 aaKnown RBP11.26□□□□□ -0.61
TPM1-220ENST00000559556 REP15Q6BDI9 236 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 REEP3Q6NUK4 255 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 SLC2A7Q6PXP3 512 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 ZNF813Q6ZN06 617 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 RINLQ6ZS11 566 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 GLCCI1Q86VQ1 547 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 SNX32Q86XE0 403 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 WDFY1Q8IWB7 410 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 SEMA6DQ8NFY4 1073 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 NFKBIDQ8NI38 313 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 SLC47A1Q96FL8 570 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 EMC6Q9BV81 110 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 RACGAP1Q9H0H5 632 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 MS4A5Q9H3V2 200 aa11.26□□□□□ -0.61
TPM1-220ENST00000559556 MRPL39Q9NYK5 338 aaKnown RBP11.26□□□□□ -0.61
TPM1-220ENST00000559556 SPEF1Q9Y4P9 236 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms