RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 CHTF8P0CG12 524 aa7.67□□□□□ -1.18
CASC4-208ENST00000559151 HTR1EP28566 365 aa7.67□□□□□ -1.18
CASC4-208ENST00000559151 CYTH1Q15438 398 aa7.67□□□□□ -1.18
CASC4-208ENST00000559151 CTRB2Q6GPI1 263 aa7.67□□□□□ -1.18
CASC4-208ENST00000559151 RIOK2Q9BVS4 552 aaKnown RBP7.67□□□□□ -1.18
CASC4-208ENST00000559151 HES7Q9BYE0 225 aa7.67□□□□□ -1.18
CASC4-208ENST00000559151 ANKRA2Q9H9E1 313 aa7.67□□□□□ -1.18
CASC4-208ENST00000559151 CALYQ9NYX4 217 aa7.67□□□□□ -1.18
CASC4-208ENST00000559151 CCDC180Q9P1Z9 1646 aa7.67□□□□□ -1.18
CASC4-208ENST00000559151 C2P06681 752 aa7.66□□□□□ -1.18
CASC4-208ENST00000559151 ICAM2P13598 275 aa7.66□□□□□ -1.18
CASC4-208ENST00000559151 ZNF43P17038 809 aa7.66□□□□□ -1.18
CASC4-208ENST00000559151 CDH6P55285 790 aa7.66□□□□□ -1.18
CASC4-208ENST00000559151 FBXW4P57775 412 aa7.66□□□□□ -1.18
CASC4-208ENST00000559151 IRX3P78415 501 aaPredicted RBP7.66□□□□□ -1.18
CASC4-208ENST00000559151 GPNMBQ14956 572 aa7.66□□□□□ -1.18
CASC4-208ENST00000559151 CARD17Q5XLA6 110 aa7.66□□□□□ -1.18
CASC4-208ENST00000559151 LRRC66Q68CR7 880 aa7.66□□□□□ -1.18
CASC4-208ENST00000559151 OR2G2Q8NGZ5 317 aa7.66□□□□□ -1.18
CASC4-208ENST00000559151 STMN2Q93045 179 aa7.66□□□□□ -1.18
CASC4-208ENST00000559151 RAB20Q9NX57 234 aa7.66□□□□□ -1.18
CASC4-208ENST00000559151 NUP50Q9UKX7 468 aa7.66□□□□□ -1.18
CASC4-208ENST00000559151 KRTAP1-4P0C5Y4 121 aa7.65□□□□□ -1.18
CASC4-208ENST00000559151 PRRX1P54821 245 aa7.65□□□□□ -1.18
CASC4-208ENST00000559151 TMEM61Q8N0U2 210 aa7.65□□□□□ -1.18
CASC4-208ENST00000559151 ZNF557Q8N988 423 aaPredicted RBP7.65□□□□□ -1.18
CASC4-208ENST00000559151 B3GNT7Q8NFL0 401 aa7.65□□□□□ -1.18
CASC4-208ENST00000559151 SLC22A8Q8TCC7 542 aa7.65□□□□□ -1.18
CASC4-208ENST00000559151 SRMSQ9H3Y6 488 aa7.65□□□□□ -1.18
CASC4-208ENST00000559151 MRPL47Q9HD33 250 aaKnown RBP7.65□□□□□ -1.18
CASC4-208ENST00000559151 ADAMTS9Q9P2N4 1935 aa7.64□□□□□ -1.19
CASC4-208ENST00000559151 KRTAP4-16G5E9R7 235 aaPredicted RBP7.64□□□□□ -1.19
CASC4-208ENST00000559151 DFNA5O60443 496 aa7.64□□□□□ -1.19
CASC4-208ENST00000559151 AGTP01019 485 aa7.64□□□□□ -1.19
CASC4-208ENST00000559151 TCN1P20061 433 aaPredicted RBP7.64□□□□□ -1.19
CASC4-208ENST00000559151 PRDX3P30048 256 aaKnown RBP7.64□□□□□ -1.19
CASC4-208ENST00000559151 NPBWR2P48146 333 aa7.64□□□□□ -1.19
CASC4-208ENST00000559151 ACLYP53396 1101 aa7.64□□□□□ -1.19
CASC4-208ENST00000559151 GBE1Q04446 702 aa7.64□□□□□ -1.19
CASC4-208ENST00000559151 VPS26BQ4G0F5 336 aa7.64□□□□□ -1.19
CASC4-208ENST00000559151 PUSL1Q8N0Z8 303 aaKnown RBP7.64□□□□□ -1.19
CASC4-208ENST00000559151 ELMO1Q92556 727 aa7.64□□□□□ -1.19
CASC4-208ENST00000559151 ILKAPQ9H0C8 392 aaPredicted RBP7.64□□□□□ -1.19
CASC4-208ENST00000559151 RANBP3Q9H6Z4 567 aaPredicted RBP7.64□□□□□ -1.19
CASC4-208ENST00000559151 ZNF256Q9Y2P7 627 aaPredicted RBP7.64□□□□□ -1.19
CASC4-208ENST00000559151 SLC25A15Q9Y619 301 aa7.64□□□□□ -1.19
CASC4-208ENST00000559151 CC2D2AQ9P2K1 1620 aa7.63□□□□□ -1.19
CASC4-208ENST00000559151 C12orf71A8MTZ7 269 aa7.63□□□□□ -1.19
CASC4-208ENST00000559151 DNALI1O14645 258 aaPredicted RBP7.63□□□□□ -1.19
CASC4-208ENST00000559151 FAM189A1O60320 539 aa7.63□□□□□ -1.19
CASC4-208ENST00000559151 TNFSF13O75888 250 aa7.63□□□□□ -1.19
CASC4-208ENST00000559151 NUP107P57740 925 aa7.63□□□□□ -1.19
CASC4-208ENST00000559151 RAET1LQ5VY80 246 aa7.63□□□□□ -1.19
CASC4-208ENST00000559151 SASS6Q6UVJ0 657 aa7.63□□□□□ -1.19
CASC4-208ENST00000559151 NAP1L5Q96NT1 182 aaPredicted RBP7.63□□□□□ -1.19
CASC4-208ENST00000559151 RASL11BQ9BPW5 248 aa7.63□□□□□ -1.19
CASC4-208ENST00000559151 DEFB127Q9H1M4 99 aa7.63□□□□□ -1.19
CASC4-208ENST00000559151 PPP1R2P9O14990 202 aa7.62□□□□□ -1.19
CASC4-208ENST00000559151 GIPP09681 153 aaPredicted RBP7.62□□□□□ -1.19
CASC4-208ENST00000559151 DAZ2Q13117 558 aaKnown RBP7.62□□□□□ -1.19
CASC4-208ENST00000559151 KIAA0087Q14695 138 aa7.62□□□□□ -1.19
CASC4-208ENST00000559151 ZNF836Q6ZNA1 936 aa7.62□□□□□ -1.19
CASC4-208ENST00000559151 THOC6Q86W42 341 aaKnown RBP7.62□□□□□ -1.19
CASC4-208ENST00000559151 GTPBP8Q8N3Z3 284 aaPredicted RBP7.62□□□□□ -1.19
CASC4-208ENST00000559151 MS4A15Q8N5U1 240 aa7.62□□□□□ -1.19
CASC4-208ENST00000559151 DCAF4L2Q8NA75 395 aa7.62□□□□□ -1.19
CASC4-208ENST00000559151 SH3GL1Q99961 368 aa7.62□□□□□ -1.19
CASC4-208ENST00000559151 OR11A1Q9GZK7 315 aa7.62□□□□□ -1.19
CASC4-208ENST00000559151 PDFQ9HBH1 243 aa7.62□□□□□ -1.19
CASC4-208ENST00000559151 DAZ3Q9NR90 486 aaKnown RBP7.62□□□□□ -1.19
CASC4-208ENST00000559151 CCL28Q9NRJ3 127 aa7.62□□□□□ -1.19
CASC4-208ENST00000559151 UNC13AQ9UPW8 1703 aa7.61□□□□□ -1.19
CASC4-208ENST00000559151 A0A075B6Q4 140 aa7.61□□□□□ -1.19
CASC4-208ENST00000559151 KLLNB2CW77 178 aa7.61□□□□□ -1.19
CASC4-208ENST00000559151 TRAF3IP2O43734 574 aaPredicted RBP7.61□□□□□ -1.19
CASC4-208ENST00000559151 SOX15O60248 233 aa7.61□□□□□ -1.19
CASC4-208ENST00000559151 MGRN1O60291 552 aa7.61□□□□□ -1.19
CASC4-208ENST00000559151 KLF8O95600 359 aaPredicted RBP7.61□□□□□ -1.19
CASC4-208ENST00000559151 IGLV1-47P01700 117 aa7.61□□□□□ -1.19
CASC4-208ENST00000559151 MRPS22P82650 360 aaKnown RBP7.61□□□□□ -1.19
CASC4-208ENST00000559151 SLC8B1Q6J4K2 584 aa7.61□□□□□ -1.19
CASC4-208ENST00000559151 CNIH2Q6PI25 160 aa7.61□□□□□ -1.19
CASC4-208ENST00000559151 Q6ZSR3 168 aa7.61□□□□□ -1.19
CASC4-208ENST00000559151 SUMF2Q8NBJ7 301 aa7.61□□□□□ -1.19
CASC4-208ENST00000559151 NDRG1Q92597 394 aaKnown RBP7.61□□□□□ -1.19
CASC4-208ENST00000559151 KIFAP3Q92845 792 aa7.61□□□□□ -1.19
CASC4-208ENST00000559151 MED8Q96G25 268 aa7.61□□□□□ -1.19
CASC4-208ENST00000559151 RARRES2Q99969 163 aa7.61□□□□□ -1.19
CASC4-208ENST00000559151 NEK6Q9HC98 313 aa7.61□□□□□ -1.19
CASC4-208ENST00000559151 ARHGAP23Q9P227 1491 aa7.61□□□□□ -1.19
CASC4-208ENST00000559151 ZNF646O15015 1829 aaPredicted RBP7.6□□□□□ -1.19
CASC4-208ENST00000559151 TCP11X1B4DZS4 312 aa7.6□□□□□ -1.19
CASC4-208ENST00000559151 ELK1P19419 428 aa7.6□□□□□ -1.19
CASC4-208ENST00000559151 CTRLP40313 264 aa7.6□□□□□ -1.19
CASC4-208ENST00000559151 ALKBH6Q3KRA9 238 aa7.6□□□□□ -1.19
CASC4-208ENST00000559151 LHFPL3Q86UP9 236 aa7.6□□□□□ -1.19
CASC4-208ENST00000559151 OR52K2Q8NGK3 314 aa7.6□□□□□ -1.19
CASC4-208ENST00000559151 GPR151Q8TDV0 419 aa7.6□□□□□ -1.19
CASC4-208ENST00000559151 ZIM3Q96PE6 472 aa7.6□□□□□ -1.19
CASC4-208ENST00000559151 PANX1Q96RD7 426 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms