RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 PNMTP11086 282 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 CD53P19397 219 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 PTNP21246 168 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 DNASE1P24855 282 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 CD40P25942 277 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 RPS5P46782 204 aaKnown RBP5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 SEC24CP53992 1094 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 NCALDP61601 193 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 OR1Q1Q15612 314 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 TAB1Q15750 504 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 BEX5Q5H9J7 111 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 ALG10BQ5I7T1 473 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 FBXW9Q5XUX1 488 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 FAM91A1Q658Y4 838 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 ULK3Q6PHR2 472 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 CASP12Q6UXS9 341 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 CCDC80Q76M96 950 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 PATL1Q86TB9 770 aaKnown RBP5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 RBM45Q8IUH3 476 aaKnown RBP5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 P3H2Q8IVL5 708 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 SLC30A8Q8IWU4 369 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 ZNF433Q8N7K0 673 aaPredicted RBP5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 OR9K2Q8NGE7 335 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 OR6T1Q8NGN1 323 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 MFSD8Q8NHS3 518 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 ABHD4Q8TB40 342 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 DNAJA4Q8WW22 397 aaPredicted RBP5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 SLC38A4Q969I6 547 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 TAAR8Q969N4 342 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 TMEM45BQ96B21 275 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 APH1AQ96BI3 265 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 RCN3Q96D15 328 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 MBD6Q96DN6 1003 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 ZNF583Q96ND8 569 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 FOXC2Q99958 501 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 TMEM204Q9BSN7 226 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 SF3B5Q9BWJ5 86 aaKnown RBP5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 TAPBPLQ9BX59 468 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 HDHD5Q9BXW7 423 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 TRIM2Q9C040 744 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 SLC7A10Q9NS82 523 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 SLC9A8Q9Y2E8 581 aa5.3□□□□□ -1.56
CTDSPL2-204ENST00000558966 NF1P21359 2839 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 TLN2Q9Y4G6 2542 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 A0A087WUJ7 227 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 OR5H1A6NKK0 313 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 CCT8L1PA6NM43 557 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 FMO6PO60774 539 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 PLAUP00749 431 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 THY1P04216 161 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 C8BP07358 591 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 ITGA5P08648 1049 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 CLEC2LP0C7M8 214 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 COX4I1P13073 169 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 CDH12P55289 794 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 KEAP1Q14145 624 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 FAM69AQ5T7M9 428 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 INTS11Q5TA45 600 aaKnown RBP5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 TSPO2Q5TGU0 170 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 WDR88Q6ZMY6 472 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 ZNF704Q6ZNC4 412 aaPredicted RBP5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 CREB3L2Q70SY1 520 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 SPATA21Q7Z572 469 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 GPAT4Q86UL3 456 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 RANBP3LQ86VV4 465 aaPredicted RBP5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 EPHX4Q8IUS5 362 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 UBE2J2Q8N2K1 259 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 PCYOX1LQ8NBM8 494 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 RP9Q8TA86 221 aaKnown RBP5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 VANGL1Q8TAA9 524 aaPredicted RBP5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 SLC25A36Q96CQ1 311 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 SLC47A1Q96FL8 570 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 MCHR1Q99705 422 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 SH3GL1Q99961 368 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 ELAC2Q9BQ52 826 aaKnown RBP5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 ECSITQ9BQ95 431 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 EVA1AQ9H8M9 152 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 UBTD1Q9HAC8 227 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 TMEM27Q9HBJ8 222 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 GID8Q9NWU2 228 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 CMTM6Q9NX76 183 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 NPAP1Q9NZP6 1156 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 B3GAT1Q9P2W7 334 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 SLC13A4Q9UKG4 626 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 C2CD3Q4AC94 2353 aa5.29□□□□□ -1.56
CTDSPL2-204ENST00000558966 TRAV36DV7A0A075B6V5 113 aa5.28□□□□□ -1.56
CTDSPL2-204ENST00000558966 CPSF4LA6NMK7 179 aaKnown RBP5.28□□□□□ -1.56
CTDSPL2-204ENST00000558966 FAM220BPB1ANY3 271 aa5.28□□□□□ -1.56
CTDSPL2-204ENST00000558966 LRRN3E7EW58 273 aa5.28□□□□□ -1.56
CTDSPL2-204ENST00000558966 CHP2O43745 196 aa5.28□□□□□ -1.56
CTDSPL2-204ENST00000558966 SNX3O60493 162 aa5.28□□□□□ -1.56
CTDSPL2-204ENST00000558966 RAD51DO75771 328 aa5.28□□□□□ -1.56
CTDSPL2-204ENST00000558966 VAMP5O95183 116 aa5.28□□□□□ -1.56
CTDSPL2-204ENST00000558966 BGLAPP02818 100 aa5.28□□□□□ -1.56
CTDSPL2-204ENST00000558966 GGT1P19440 569 aa5.28□□□□□ -1.56
CTDSPL2-204ENST00000558966 DRD4P21917 467 aa5.28□□□□□ -1.56
CTDSPL2-204ENST00000558966 CBLP22681 906 aa5.28□□□□□ -1.56
CTDSPL2-204ENST00000558966 GRPRP30550 384 aa5.28□□□□□ -1.56
CTDSPL2-204ENST00000558966 SDHAP31040 664 aa5.28□□□□□ -1.56
CTDSPL2-204ENST00000558966 SELENOPP49908 381 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms