RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 SMU1Q2TAY7 513 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 PLPPR5Q32ZL2 321 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 TMEM176BQ3YBM2 270 aaPredicted RBP3.76□□□□□ -1.81
SPG11-211ENST00000558561 GPAT3Q53EU6 434 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 RAET1LQ5VY80 246 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 NSUN5P2Q63ZY6 315 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 TMEM211Q6ICI0 200 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 DGAT2L7PQ6IED9 249 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 ZCCHC12Q6PEW1 402 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 TMEM88Q6PEY1 159 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 NUFIP2Q7Z417 695 aaKnown RBP3.76□□□□□ -1.81
SPG11-211ENST00000558561 CROCCP2Q86T23 111 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 IFNEQ86WN2 208 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 WDFY1Q8IWB7 410 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 SAMD14Q8IZD0 417 aaPredicted RBP3.76□□□□□ -1.81
SPG11-211ENST00000558561 CHDHQ8NE62 594 aaPredicted RBP3.76□□□□□ -1.81
SPG11-211ENST00000558561 C7orf57Q8NEG2 295 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 OR4D11Q8NGI4 311 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 B4GALNT2Q8NHY0 566 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 ZPLD1Q8TCW7 415 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 LRRC8CQ8TDW0 803 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 SLC38A5Q8WUX1 472 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 OSTF1Q92882 214 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 NEURL3Q96EH8 262 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 ADGRG7Q96K78 797 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 ARL5BQ96KC2 179 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 MAGEB18Q96M61 343 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 C7orf26Q96N11 449 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 MS4A4EQ96PG1 132 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 PANX1Q96RD7 426 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 STACQ99469 402 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 PIGQQ9BRB3 760 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 PINK1Q9BXM7 581 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 TBL1XR1Q9BZK7 514 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 OR11A1Q9GZK7 315 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 OPN3Q9H1Y3 402 aaPredicted RBP3.76□□□□□ -1.81
SPG11-211ENST00000558561 VIPAS39Q9H9C1 493 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 TPT1P8Q9HAU6 139 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 MOV10Q9HCE1 1003 aaKnown RBP3.76□□□□□ -1.81
SPG11-211ENST00000558561 KCNJ16Q9NPI9 418 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 TCF7L2Q9NQB0 619 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 CTPS2Q9NRF8 586 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 SDR39U1Q9NRG7 319 aaPredicted RBP3.76□□□□□ -1.81
SPG11-211ENST00000558561 UBQLN4Q9NRR5 601 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 FGFR1OP2Q9NVK5 253 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 CLCF1Q9UBD9 225 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 DKKL1Q9UK85 242 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 BAG5Q9UL15 447 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 FAF1Q9UNN5 650 aaPredicted RBP3.76□□□□□ -1.81
SPG11-211ENST00000558561 GPR52Q9Y2T5 361 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 MRPS18CQ9Y3D5 142 aaKnown RBP3.76□□□□□ -1.81
SPG11-211ENST00000558561 CREBBPQ92793 2442 aa3.76□□□□□ -1.81
SPG11-211ENST00000558561 TRBV5-3A0A0A0MS03 114 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 A0A0G2JND7 137 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 LOC100653049A0A140TA62 436 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 TMEM72A0PK05 275 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 CD8B2A6NJW9 211 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 TRPC5OSA6NMA1 111 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 HMGB1P1B2RPK0 211 aaPredicted RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 GTPBP1O00178 669 aaKnown RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 NR5A2O00482 541 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 RFXANKO14593 260 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 ADAMDEC1O15204 470 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 WDR1O75083 606 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 STX11O75558 287 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 KRT34O76011 436 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 ACTL6AO96019 429 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 HOXD4P09016 255 aaPredicted RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 LYL1P12980 280 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 CHMP24386 653 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 ELAVL4P26378 380 aaKnown RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 CHRNB4P30926 498 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 TIMP3P35625 211 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 CHI3L1P36222 383 aaPredicted RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 CRATP43155 626 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 PCP4P48539 62 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 IDH2P48735 452 aaKnown RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 TMED10P49755 219 aaKnown RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 GZMMP51124 257 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 P2RX1P51575 399 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 CASP6P55212 293 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 RPP38P78345 283 aaKnown RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 KCNJ10P78508 379 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 TLE4Q04727 773 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 LTBQ06643 244 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 LGALS3BPQ08380 585 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 FOXD4Q12950 439 aaPredicted RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 MAD2L1Q13257 205 aaPredicted RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 SKP2Q13309 424 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 KLF9Q13886 244 aaPredicted RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 CAPRIN1Q14444 709 aaKnown RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 FGFBP1Q14512 234 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 GANABQ14697 944 aaKnown RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 PON3Q15166 354 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 QPRTQ15274 297 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 RGNQ15493 299 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 ZNHIT3Q15649 155 aaPredicted RBP3.75□□□□□ -1.81
SPG11-211ENST00000558561 RUNDC3AQ59EK9 446 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 RIPPLY2Q5TAB7 128 aa3.75□□□□□ -1.81
SPG11-211ENST00000558561 ANXA8L1Q5VT79 327 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms