RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 GABRA1P14867 456 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 TDGF1P3P51864 188 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 POU3F1Q03052 451 aaPredicted RBP13.28□□□□□ -0.28
VPS18-202ENST00000558474 SRYQ05066 204 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.28□□□□□ -0.28
VPS18-202ENST00000558474 TMED1Q13445 227 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 C1DQ13901 141 aaKnown RBP13.28□□□□□ -0.28
VPS18-202ENST00000558474 RBM48Q5RL73 367 aaKnown RBP13.28□□□□□ -0.28
VPS18-202ENST00000558474 ZNF362Q5T0B9 420 aaPredicted RBP13.28□□□□□ -0.28
VPS18-202ENST00000558474 ARMC4Q5T2S8 1044 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 C19orf48Q6RUI8 117 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 CREB3L2Q70SY1 520 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 IGFN1Q86VF2 1251 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 LSM14AQ8ND56 463 aaKnown RBP13.28□□□□□ -0.28
VPS18-202ENST00000558474 OR6X1Q8NH79 312 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 RNF128Q8TEB7 428 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 RFKQ969G6 155 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 ZNF566Q969W8 418 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 TSPAN10Q9H1Z9 355 aaPredicted RBP13.28□□□□□ -0.28
VPS18-202ENST00000558474 GLRX2Q9NS18 164 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 PLCXD1Q9NUJ7 323 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 CLN6Q9NWW5 311 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 UBAP1Q9NZ09 502 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 KLHL9Q9P2J3 617 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 ADAM18Q9Y3Q7 739 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 LAMA5O15230 3695 aa13.28□□□□□ -0.28
VPS18-202ENST00000558474 TEX13CA0A0J9YWL9 993 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 ZNF716A6NP11 495 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 ZNF814B7Z6K7 855 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 PRR23D1E9PI22 279 aaPredicted RBP13.27□□□□□ -0.29
VPS18-202ENST00000558474 TRAF3IP2O43734 574 aaPredicted RBP13.27□□□□□ -0.29
VPS18-202ENST00000558474 TLX2O43763 284 aaPredicted RBP13.27□□□□□ -0.29
VPS18-202ENST00000558474 PRR23D2P0DMB1 279 aaPredicted RBP13.27□□□□□ -0.29
VPS18-202ENST00000558474 IFNGR1P15260 489 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 HIST1H1CP16403 213 aaKnown RBP13.27□□□□□ -0.29
VPS18-202ENST00000558474 PTGS2P35354 604 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 ACVR1BP36896 505 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 SLC25A1P53007 311 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 KRR1Q13601 381 aaKnown RBP13.27□□□□□ -0.29
VPS18-202ENST00000558474 C6orf141Q5SZD1 244 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 NXNL2Q5VZ03 156 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 UGT2A3Q6UWM9 527 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 GPAT4Q86UL3 456 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 JAZF1Q86VZ6 243 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 LSRQ86X29 649 aaPredicted RBP13.27□□□□□ -0.29
VPS18-202ENST00000558474 GID4Q8IVV7 300 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 CCDC103Q8IW40 242 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 CISD2Q8N5K1 135 aaKnown RBP13.27□□□□□ -0.29
VPS18-202ENST00000558474 SLC37A3Q8NCC5 494 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 OR9K2Q8NGE7 335 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 ASB10Q8WXI3 467 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 SNRNP40Q96DI7 357 aaKnown RBP13.27□□□□□ -0.29
VPS18-202ENST00000558474 ZNF845Q96IR2 970 aaPredicted RBP13.27□□□□□ -0.29
VPS18-202ENST00000558474 Q96M85 177 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 DDOQ99489 341 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 TUBA1CQ9BQE3 449 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 CALHM2Q9HA72 323 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 RASSF1Q9NS23 344 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 EMC3Q9P0I2 261 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 BLOC1S6Q9UL45 172 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 RCE1Q9Y256 329 aa13.27□□□□□ -0.29
VPS18-202ENST00000558474 CLCA1A8K7I4 914 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 ZNF724A8MTY0 619 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 KDM4EB2RXH2 506 aaPredicted RBP13.26□□□□□ -0.29
VPS18-202ENST00000558474 PRODHO43272 600 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 WDR1O75083 606 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 WBP4O75554 376 aaKnown RBP13.26□□□□□ -0.29
VPS18-202ENST00000558474 TNFAIP8O95379 198 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 RENP00797 406 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 HLA-DOBP13765 273 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 EDN3P14138 238 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 ACVR2AP27037 513 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 CENPAP49450 140 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 CHN2P52757 468 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 RASGEF1BQ0VAM2 473 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 ITGADQ13349 1161 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 PON3Q15166 354 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 MESTQ5EB52 335 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 SLC35D3Q5M8T2 416 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 SLC35F1Q5T1Q4 408 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 AADACL4Q5VUY2 407 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 CXXC5Q7LFL8 322 aaKnown RBP13.26□□□□□ -0.29
VPS18-202ENST00000558474 KDM8Q8N371 416 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 NPEPL1Q8NDH3 523 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 OR52E2Q8NGJ4 325 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 APH1BQ8WW43 257 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 RELTQ969Z4 430 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 TMEM45BQ96B21 275 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 INTS12Q96CB8 462 aaKnown RBP13.26□□□□□ -0.29
VPS18-202ENST00000558474 SLC25A44Q96H78 314 aaPredicted RBP13.26□□□□□ -0.29
VPS18-202ENST00000558474 LRR1Q96L50 414 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 CNTNAP3BQ96NU0 1288 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 IL4I1Q96RQ9 567 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 ALG12Q9BV10 488 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 CNTNAP3Q9BZ76 1288 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 PRRG4Q9BZD6 226 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 ZNF407Q9C0G0 2248 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 BCO1Q9HAY6 547 aa13.26□□□□□ -0.29
VPS18-202ENST00000558474 VSX1Q9NZR4 365 aaPredicted RBP13.26□□□□□ -0.29
VPS18-202ENST00000558474 H2AFY2Q9P0M6 372 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms