RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 THBS1P07996 1170 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 CD14P08571 375 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 APEHP13798 732 aaKnown RBP10.25□□□□□ -0.77
PCAT29-201ENST00000558411 PRSS3P35030 304 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 CAV2P51636 162 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 PRKXP51817 358 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 TOMM20Q15388 145 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 MST1LQ2TV78 715 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 BEX5Q5H9J7 111 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 FAM46CQ5VWP2 391 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 ZNF425Q6IV72 752 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 ZCCHC12Q6PEW1 402 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 WDR88Q6ZMY6 472 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 ZNF836Q6ZNA1 936 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 FRRS1Q6ZNA5 592 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 LRRTM1Q86UE6 522 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 TMEM229BQ8NBD8 167 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 NUP43Q8NFH3 380 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 RGP1Q92546 391 aaPredicted RBP10.25□□□□□ -0.77
PCAT29-201ENST00000558411 OTUB2Q96DC9 234 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 C14orf79Q96F83 325 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 RBM18Q96H35 190 aaKnown RBP10.25□□□□□ -0.77
PCAT29-201ENST00000558411 TTTY10Q9BZA0 68 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 DPEP2Q9H4A9 486 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 MARCH5Q9NX47 278 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 STEAP1Q9UHE8 339 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 RHPN2P1A8MT19 583 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 OR2T1O43869 369 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 CTAG2O75638 210 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 CTSLP07711 333 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 HOXC4P09017 264 aaPredicted RBP10.25□□□□□ -0.77
PCAT29-201ENST00000558411 FAM157CP0CG43 387 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 ERGP11308 486 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 SLC6A6P31641 620 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 PDX1P52945 283 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 ATP1B3P54709 279 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 RAB2AP61019 212 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 EEF1A1P68104 462 aaKnown RBP10.25□□□□□ -0.77
PCAT29-201ENST00000558411 DEFA6Q01524 100 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 AIMP2Q13155 320 aaKnown RBP10.25□□□□□ -0.77
PCAT29-201ENST00000558411 DHRS2Q13268 280 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 HMGN3Q15651 99 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 AMZ1Q400G9 498 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 Q499Y3 187 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 C9orf64Q5T6V5 341 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 SLC6A19Q695T7 634 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 CXCL17Q6UXB2 119 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 RTN4RL1Q86UN2 441 aaPredicted RBP10.25□□□□□ -0.77
PCAT29-201ENST00000558411 GABRG1Q8N1C3 465 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 NUDCD2Q8WVJ2 157 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 MRPL38Q96DV4 380 aaKnown RBP10.25□□□□□ -0.77
PCAT29-201ENST00000558411 ZMYND19Q96E35 227 aaPredicted RBP10.25□□□□□ -0.77
PCAT29-201ENST00000558411 MALSU1Q96EH3 234 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 PFDN5Q99471 154 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 ZNF426Q9BUY5 554 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 LGR4Q9BXB1 951 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 PCBD2Q9H0N5 130 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 CHRDQ9H2X0 955 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 SYNPO2LQ9H987 977 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 TRPV4Q9HBA0 871 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 RHOFQ9HBH0 211 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 SLC17A5Q9NRA2 495 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 C2orf42Q9NWW7 574 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 WBP1LQ9NX94 342 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 ZNF107Q9UII5 783 aaPredicted RBP10.25□□□□□ -0.77
PCAT29-201ENST00000558411 LHX6Q9UPM6 363 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 MED31Q9Y3C7 131 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 POMT1Q9Y6A1 747 aa10.25□□□□□ -0.77
PCAT29-201ENST00000558411 ZNF705EA8MWA4 302 aaPredicted RBP10.24□□□□□ -0.77
PCAT29-201ENST00000558411 TXNL1O43396 289 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 FCMRO60667 390 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 SRPX2O60687 465 aaPredicted RBP10.24□□□□□ -0.77
PCAT29-201ENST00000558411 LILRB5O75023 590 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 DNAJB6O75190 326 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 CLEC3AO75596 197 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 ZFPL1O95159 310 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 FARS2O95363 451 aaKnown RBP10.24□□□□□ -0.77
PCAT29-201ENST00000558411 WNT11O96014 354 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 OR8U8P0C7N1 319 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 MUC1P15941 1255 aaPredicted RBP10.24□□□□□ -0.77
PCAT29-201ENST00000558411 ZNF14P17017 642 aaPredicted RBP10.24□□□□□ -0.77
PCAT29-201ENST00000558411 ADRA2CP18825 462 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 CSNK2A2P19784 350 aaPredicted RBP10.24□□□□□ -0.77
PCAT29-201ENST00000558411 PSMB10P40306 273 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 SSR2P43308 183 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 HTR5AP47898 357 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 HTRA4P83105 476 aaPredicted RBP10.24□□□□□ -0.77
PCAT29-201ENST00000558411 PRKCZQ05513 592 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 DUSP8Q13202 625 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 ARHGAP19Q14CB8 494 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 TMEM35AQ53FP2 167 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 NKAIN2Q5VXU1 208 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 OR10K2Q6IF99 312 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 MRM1Q6IN84 353 aaKnown RBP10.24□□□□□ -0.77
PCAT29-201ENST00000558411 TMEM205Q6UW68 189 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 ANGPTL5Q86XS5 388 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 AMER3Q8N944 861 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 OR1J2Q8NGS2 313 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 GPX8Q8TED1 209 aa10.24□□□□□ -0.77
PCAT29-201ENST00000558411 ING5Q8WYH8 240 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms