RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 FREM1Q5H8C1 2179 aa7.46□□□□□ -1.22
TPM1-213ENST00000558400 SLC35F4A4IF30 521 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 B2RBV5 119 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 SIAH2O43255 324 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 ARHGEF9O43307 516 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 RNF13O43567 381 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 MGRN1O60291 552 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 SHOX2O60902 331 aaPredicted RBP7.45□□□□□ -1.22
TPM1-213ENST00000558400 ITGA5P08648 1049 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 ASAH2BP0C7U1 165 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 UMPSP11172 480 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 FUT1P19526 365 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 CALB2P22676 271 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 LOXP28300 417 aaPredicted RBP7.45□□□□□ -1.22
TPM1-213ENST00000558400 SELENOPP49908 381 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 ART1P52961 327 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 SMIM11AP58511 58 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 UBE2NP61088 152 aaKnown RBP7.45□□□□□ -1.22
TPM1-213ENST00000558400 MXRA7P84157 204 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 TRAM2Q15035 370 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 DEFB113Q30KQ7 82 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 ANKRD16Q6P6B7 361 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 NHLRC1Q6VVB1 395 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 WDR88Q6ZMY6 472 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 ZNF704Q6ZNC4 412 aaPredicted RBP7.45□□□□□ -1.22
TPM1-213ENST00000558400 HDDC2Q7Z4H3 204 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 NKAIN4Q8IVV8 208 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 FITM2Q8N6M3 262 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 ZNF611Q8N823 705 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 FAM169BQ8N8A8 192 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 SGTBQ96EQ0 304 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 TMEM204Q9BSN7 226 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 LIME1Q9H400 295 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 MEPEQ9NQ76 525 aaPredicted RBP7.45□□□□□ -1.22
TPM1-213ENST00000558400 SLC17A5Q9NRA2 495 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 ARL8BQ9NVJ2 186 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 TAS2R5Q9NYW4 299 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 CD300AQ9UGN4 299 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 MAGEL2Q9UJ55 1249 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 A4GNTQ9UNA3 340 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 PLEKHA6Q9Y2H5 1048 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 RNF115Q9Y4L5 304 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 SLC25A15Q9Y619 301 aa7.45□□□□□ -1.22
TPM1-213ENST00000558400 A0A1W2PPR1 153 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 A0A1W2PRG6 482 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 DPRXA6NFQ7 191 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 CENPBD1B2RD01 187 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 BLOC1S5-TXNDC5H3BN57 136 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 HS3ST1O14792 307 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 TRAF3IP2O43734 574 aaPredicted RBP7.44□□□□□ -1.22
TPM1-213ENST00000558400 UPK3AO75631 287 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 OR7A10O76100 309 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 ATE1O95260 518 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 BCL10O95999 233 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 HPRP00739 348 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 RHCEP18577 417 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 CDH2P19022 906 aaPredicted RBP7.44□□□□□ -1.22
TPM1-213ENST00000558400 CD53P19397 219 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 TNFRSF1BP20333 461 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 SLC25A3Q00325 362 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 ROR2Q01974 943 aaKnown RBP7.44□□□□□ -1.22
TPM1-213ENST00000558400 POU3F1Q03052 451 aaPredicted RBP7.44□□□□□ -1.22
TPM1-213ENST00000558400 BSPH1Q075Z2 132 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 TAF11Q15544 211 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 FXNQ16595 210 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 C3orf36Q3SXR2 165 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 SLC35D2Q76EJ3 337 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 NANOGNBQ7Z5D8 188 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 VTCN1Q7Z7D3 282 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 TSPYL5Q86VY4 417 aaPredicted RBP7.44□□□□□ -1.22
TPM1-213ENST00000558400 C20orf196Q8IYI0 205 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 DEFB107AQ8IZN7 70 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 OFCC1Q8IZS5 231 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 LRRC75A-AS1Q8N1F1 130 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 WDR31Q8NA23 367 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 OR6N1Q8NGY5 312 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 OR52N5Q8NH56 324 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 OR6X1Q8NH79 312 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 TMEM255BQ8WV15 326 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 NRGNQ92686 78 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 BCL2L2Q92843 193 aaPredicted RBP7.44□□□□□ -1.22
TPM1-213ENST00000558400 MCUR1Q96AQ8 359 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 SLC25A44Q96H78 314 aaPredicted RBP7.44□□□□□ -1.22
TPM1-213ENST00000558400 PYURFQ96I23 114 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 HSH2DQ96JZ2 352 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 OR2M2Q96R28 347 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 CXXC4Q9H2H0 198 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 DENND2DQ9H6A0 471 aaPredicted RBP7.44□□□□□ -1.22
TPM1-213ENST00000558400 UBTD1Q9HAC8 227 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 NMNAT1Q9HAN9 279 aaPredicted RBP7.44□□□□□ -1.22
TPM1-213ENST00000558400 GPR35Q9HC97 309 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 FAIMQ9NVQ4 179 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 SEC14L4Q9UDX3 406 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 EGFL7Q9UHF1 273 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 ENPP4Q9Y6X5 453 aa7.44□□□□□ -1.22
TPM1-213ENST00000558400 NIPBLQ6KC79 2804 aaeCLIP7.44□□□□□ -1.22
TPM1-213ENST00000558400 RTTNQ86VV8 2226 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 ARPC4-TTLL3A0A0A6YYG9 625 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 A0A1W2PRQ8 180 aa7.43□□□□□ -1.22
TPM1-213ENST00000558400 NPIPB13A6NJU9 1138 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms