RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 GPAT4Q86UL3 456 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 ARIH2OSQ8N7S6 290 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 FAM81AQ8TBF8 368 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 WNT2BQ93097 391 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 SNRNP40Q96DI7 357 aaKnown RBP11.09□□□□□ -0.63
TPM1-209ENST00000558072 KATNB1Q9BVA0 655 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 TVP23BQ9NYZ1 205 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 SPRR3Q9UBC9 169 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 BLOC1S6Q9UL45 172 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 RCE1Q9Y256 329 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 IER3IP1Q9Y5U9 82 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 NBEAQ8NFP9 2946 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 IGKV3D-15A0A087WSY6 115 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 IRGMA1A4Y4 181 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 CD8B2A6NJW9 211 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 C11orf98E9PRG8 122 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 ATXN7O15265 892 aaPredicted RBP11.08□□□□□ -0.64
TPM1-209ENST00000558072 PLGP00747 810 aaPredicted RBP11.08□□□□□ -0.64
TPM1-209ENST00000558072 CRHP06850 196 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 ACVR2AP27037 513 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 CRABP1P29762 137 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 MLLT10P55197 1068 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 CXCR4P61073 352 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 POU3F1Q03052 451 aaPredicted RBP11.08□□□□□ -0.64
TPM1-209ENST00000558072 FHL1Q13642 323 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 SLC17A1Q14916 467 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 PON3Q15166 354 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 GXYLT1Q4G148 440 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 ARMC4Q5T2S8 1044 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 ANKRD34AQ69YU3 496 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 ABLIM2Q6H8Q1 611 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 MEX3DQ86XN8 651 aaKnown RBP11.08□□□□□ -0.64
TPM1-209ENST00000558072 GID4Q8IVV7 300 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 MARVELD2Q8N4S9 558 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 FAM26EQ8N5C1 309 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 LRRC75AQ8NAA5 344 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 OR9K2Q8NGE7 335 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 OR6X1Q8NH79 312 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 MOSPD2Q8NHP6 518 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 FAM57AQ8TBR7 257 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 RNF128Q8TEB7 428 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 MUS81Q96NY9 551 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 RBP7Q96R05 134 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 MYCBPQ99417 103 aaPredicted RBP11.08□□□□□ -0.64
TPM1-209ENST00000558072 ALG12Q9BV10 488 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 PLA2G12AQ9BZM1 189 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 TP63Q9H3D4 680 aaPredicted RBP11.08□□□□□ -0.64
TPM1-209ENST00000558072 B3GAT2Q9NPZ5 323 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 SPENQ96T58 3664 aaKnown RBP11.08□□□□□ -0.64
TPM1-209ENST00000558072 BSNQ9UPA5 3926 aa11.08□□□□□ -0.64
TPM1-209ENST00000558072 DNAJC13O75165 2243 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 CLCA1A8K7I4 914 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 PRR23D1E9PI22 279 aaPredicted RBP11.07□□□□□ -0.64
TPM1-209ENST00000558072 SMAD9O15198 467 aaKnown RBP11.07□□□□□ -0.64
TPM1-209ENST00000558072 SURF4O15260 269 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 PPP1R3DO95685 299 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 IGHG1P01857 330 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 F13BP05160 661 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 TPOP07202 933 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 YES1P07947 543 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 PRR23D2P0DMB1 279 aaPredicted RBP11.07□□□□□ -0.64
TPM1-209ENST00000558072 ACVR1BP36896 505 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 POLR2IP36954 125 aaKnown RBP11.07□□□□□ -0.64
TPM1-209ENST00000558072 P2RY4P51582 365 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 TDGF1P3P51864 188 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 FXYD6P3P58550 94 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 ERVK-25P63136 954 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 KRR1Q13601 381 aaKnown RBP11.07□□□□□ -0.64
TPM1-209ENST00000558072 ACKR1Q16570 336 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 OCLNQ16625 522 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 TMEM201Q5SNT2 666 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 NSUN5P2Q63ZY6 315 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 PLXDC2Q6UX71 529 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 THSD4Q6ZMP0 1018 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 CREB3L2Q70SY1 520 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 FAM122BQ7Z309 247 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 ABHD12BQ7Z5M8 362 aaPredicted RBP11.07□□□□□ -0.64
TPM1-209ENST00000558072 ADGRE4PQ86SQ3 457 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 ST6GALNAC3Q8NDV1 305 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 OR8D4Q8NGM9 314 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 RHOXF1Q8NHV9 184 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 TMEM163Q8TC26 289 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 CPT1CQ8TCG5 803 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 TMEM45BQ96B21 275 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 SLC25A44Q96H78 314 aaPredicted RBP11.07□□□□□ -0.64
TPM1-209ENST00000558072 GMPPAQ96IJ6 420 aaPredicted RBP11.07□□□□□ -0.64
TPM1-209ENST00000558072 LRR1Q96L50 414 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 TUBA1CQ9BQE3 449 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 SRXN1Q9BYN0 137 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 BCO1Q9HAY6 547 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 PNPLA3Q9NST1 481 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 ASF1BQ9NVP2 202 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 SCN3BQ9NY72 215 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 ZNF346Q9UL40 294 aaKnown RBP11.07□□□□□ -0.64
TPM1-209ENST00000558072 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.07□□□□□ -0.64
TPM1-209ENST00000558072 MOKQ9UQ07 419 aa11.07□□□□□ -0.64
TPM1-209ENST00000558072 TLX2O43763 284 aaPredicted RBP11.06□□□□□ -0.64
TPM1-209ENST00000558072 SLC43A1O75387 559 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 C1QL1O75973 258 aa11.06□□□□□ -0.64
TPM1-209ENST00000558072 IFNGR1P15260 489 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms