RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 TP53I11O14683 189 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 GNB5O14775 395 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 PLD2O14939 933 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 PLA2G10O15496 165 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 OIP5O43482 229 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 OR2T1O43869 369 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 ITGA10O75578 1167 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 TSPAN9O75954 239 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 SLC2A10O95528 541 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 CD14P08571 375 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 ASAH2BP0C7U1 165 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 LIMS3P0CW19 117 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 LIMS4P0CW20 117 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 PSKH1P11801 424 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 PTGS2P35354 604 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 FOLR3P41439 243 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 RPS7P62081 194 aaKnown RBP11.49□□□□□ -0.57
SHMT2-229ENST00000557348 BTBD16Q32M84 506 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 TMEM81Q6P7N7 255 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 MAMDC2Q7Z304 686 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-229ENST00000557348 LAX1Q8IWV1 398 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 PHC2Q8IXK0 858 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 M1APQ8TC57 530 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 UBASH3BQ8TF42 649 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 HGDQ93099 445 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 OTULINQ96BN8 352 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 LIN37Q96GY3 246 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-229ENST00000557348 MAP6Q96JE9 813 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 UBL7Q96S82 380 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-229ENST00000557348 SECISBP2Q96T21 854 aaKnown RBP11.49□□□□□ -0.57
SHMT2-229ENST00000557348 TEAD3Q99594 435 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 PPP1R3EQ9H7J1 279 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 EXOSC4Q9NPD3 245 aaKnown RBP11.49□□□□□ -0.57
SHMT2-229ENST00000557348 MED9Q9NWA0 146 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 COPZ2Q9P299 210 aa11.49□□□□□ -0.57
SHMT2-229ENST00000557348 ZDBF2Q9HCK1 2354 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 IGLV3-32A0A0A0MS00 114 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 A0A0X1KG70 313 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 A0A1W2PQL4 384 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-229ENST00000557348 A8MVM7 634 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 J3QRE1 110 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 SOCS6O14544 535 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 LYRM1O43325 122 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 GALR2O43603 387 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-229ENST00000557348 TXNDC12O95881 172 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 DHFRP00374 187 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 TPOP07202 933 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 ADRA2AP08913 450 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 RAB40ALP0C0E4 278 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 FBXO45P0C2W1 286 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 ZNF806P0C7X5 589 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 SLC2A2P11168 524 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-229ENST00000557348 CD53P19397 219 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 SLC2A5P22732 501 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 GABRA5P31644 462 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 UQCRC1P31930 480 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 APOBEC1P41238 236 aaKnown RBP11.48□□□□□ -0.57
SHMT2-229ENST00000557348 SNTA1Q13424 505 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 CRMP1Q14194 572 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 GGTLC2Q14390 218 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 GRK1Q15835 563 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 PYDC2Q56P42 97 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 ALG10Q5BKT4 473 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 TOR2AQ5JU69 321 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 FAM69AQ5T7M9 428 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 JAZF1Q86VZ6 243 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 NAXDQ8IW45 347 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 SLC38A6Q8IZM9 456 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 OR51G2Q8NGK0 314 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 OR5M3Q8NGP4 307 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 GPR119Q8TDV5 335 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 ELP5Q8TE02 316 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 TAAR9Q96RI9 348 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 ENKD1Q9H0I2 346 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 MMP28Q9H239 520 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 ABCB9Q9NP78 766 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 TIGARQ9NQ88 270 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 MOKQ9UQ07 419 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 POLHQ9Y253 713 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 BOLA1Q9Y3E2 137 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 PTRH2Q9Y3E5 179 aaKnown RBP11.48□□□□□ -0.57
SHMT2-229ENST00000557348 LOXL2Q9Y4K0 774 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 SPIN1Q9Y657 262 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-229ENST00000557348 ALG5Q9Y673 324 aa11.48□□□□□ -0.57
SHMT2-229ENST00000557348 IGHV1-45A0A0A0MS14 117 aa11.47□□□□□ -0.57
SHMT2-229ENST00000557348 DAPL1A0PJW8 107 aa11.47□□□□□ -0.57
SHMT2-229ENST00000557348 FAM183AA6NL82 134 aa11.47□□□□□ -0.57
SHMT2-229ENST00000557348 MCIDASD6RGH6 385 aa11.47□□□□□ -0.57
SHMT2-229ENST00000557348 PRKNO60260 465 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-229ENST00000557348 WDPCPO95876 746 aa11.47□□□□□ -0.57
SHMT2-229ENST00000557348 CCL4P13236 92 aa11.47□□□□□ -0.57
SHMT2-229ENST00000557348 ICAM2P13598 275 aa11.47□□□□□ -0.57
SHMT2-229ENST00000557348 ARSBP15848 533 aa11.47□□□□□ -0.57
SHMT2-229ENST00000557348 FKBP2P26885 142 aaKnown RBP11.47□□□□□ -0.57
SHMT2-229ENST00000557348 MST1P26927 711 aa11.47□□□□□ -0.57
SHMT2-229ENST00000557348 SDHAP31040 664 aa11.47□□□□□ -0.57
SHMT2-229ENST00000557348 CENPAP49450 140 aa11.47□□□□□ -0.57
SHMT2-229ENST00000557348 SLC25A1P53007 311 aa11.47□□□□□ -0.57
SHMT2-229ENST00000557348 PER3P56645 1201 aa11.47□□□□□ -0.57
SHMT2-229ENST00000557348 ACTA2P62736 377 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms