RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 CDH15P55291 814 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 ABCE1P61221 599 aaKnown RBP7.49□□□□□ -1.21
VRK1-206ENST00000557222 TEKQ02763 1124 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 HGFACQ04756 655 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 IFFO1Q0D2I5 559 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 RIN1Q13671 783 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 LARS2Q15031 903 aaKnown RBP7.49□□□□□ -1.21
VRK1-206ENST00000557222 PDCD2Q16342 344 aaPredicted RBP7.49□□□□□ -1.21
VRK1-206ENST00000557222 C1orf140Q5VVS0 124 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 REP15Q6BDI9 236 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 C5orf46Q6UWT4 87 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 ZNF621Q6ZSS3 439 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 IL17RELQ6ZVW7 336 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 ZNF781Q8N8C0 355 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 ANKS4BQ8N8V4 417 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 GLB1L3Q8NCI6 653 aaPredicted RBP7.49□□□□□ -1.21
VRK1-206ENST00000557222 OR52P1PQ8NH57 321 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 C3orf49Q96BT1 292 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 PANX1Q96RD7 426 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 DENND2DQ9H6A0 471 aaPredicted RBP7.49□□□□□ -1.21
VRK1-206ENST00000557222 MEAF6Q9HAF1 191 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 C12orf10Q9HB07 376 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 P2RX2Q9UBL9 471 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 IFT52Q9Y366 437 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 IGHV2OR16-5A0A0B4J2B6 119 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 A0A0G2JPF8 293 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 TMEM129A0AVI4 362 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 HNRNPCL2B2RXH8 293 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 B4DSR2 109 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 HNRNPCL3B7ZW38 293 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 FTCDNL1E5RQL4 147 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 hCG_2039718K7EN88 272 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 TM9SF1O15321 606 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 ITM2AO43736 263 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 OR2T1O43869 369 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 HNRNPCL1O60812 293 aaKnown RBP7.48□□□□□ -1.21
VRK1-206ENST00000557222 SLC43A1O75387 559 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 UPK3AO75631 287 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 AHSA1O95433 338 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 TSPAN15O95858 294 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 IL6P05231 212 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 ZCCHC18P0CG32 403 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 HNRNPCL4P0DMR1 293 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 ZNF43P17038 809 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 APEX1P27695 318 aaKnown RBP7.48□□□□□ -1.21
VRK1-206ENST00000557222 CALCRP30988 508 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 THBS4P35443 961 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 SLC1A6P48664 564 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 ROR2Q01974 943 aaKnown RBP7.48□□□□□ -1.21
VRK1-206ENST00000557222 CHI3L2Q15782 390 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 SLC9B1Q4ZJI4 515 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 PRAMEF8Q5VWM4 474 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 PRAMEF7Q5VXH5 474 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 NIPAL3Q6P499 406 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 LINGO2Q7L985 606 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 NET1Q7Z628 596 aaPredicted RBP7.48□□□□□ -1.21
VRK1-206ENST00000557222 HMGN2P46Q86SG4 172 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 TEX29Q8N6K0 151 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 PIK3C3Q8NEB9 887 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 OXGR1Q96P68 337 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 OR52E6Q96RD3 313 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 SPATA9Q9BWV2 254 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 NELFAQ9H3P2 528 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 MS4A5Q9H3V2 200 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 CACYBPQ9HB71 228 aaKnown RBP7.48□□□□□ -1.21
VRK1-206ENST00000557222 RLIMQ9NVW2 624 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 ADPRHL2Q9NX46 363 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 USP22Q9UPT9 525 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 CMAHPQ9Y471 501 aa7.48□□□□□ -1.21
VRK1-206ENST00000557222 PKD1L1Q8TDX9 2849 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 LRP5LA4QPB2 252 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 TMEM247A6NEH6 219 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 NR5A2O00482 541 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 RFXANKO14593 260 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 AIM2O14862 343 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 SYNGR3O43761 229 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 AKAP8O43823 692 aaKnown RBP7.47□□□□□ -1.21
VRK1-206ENST00000557222 GKN3PP0CG01 181 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 PNMTP11086 282 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 IFNGR1P15260 489 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 CREB1P16220 341 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 NCF2P19878 526 aaPredicted RBP7.47□□□□□ -1.21
VRK1-206ENST00000557222 COMPP49747 757 aaPredicted RBP7.47□□□□□ -1.21
VRK1-206ENST00000557222 MVDP53602 400 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 UFM1P61960 85 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 MRPS11P82912 194 aaKnown RBP7.47□□□□□ -1.21
VRK1-206ENST00000557222 ARF1P84077 181 aaKnown RBP7.47□□□□□ -1.21
VRK1-206ENST00000557222 RUNX1T1Q06455 604 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 DAG1Q14118 895 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 MFSD13AQ14CX5 517 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 MAPK11Q15759 364 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 ADRM1Q16186 407 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 PDCD4Q53EL6 469 aaKnown RBP7.47□□□□□ -1.21
VRK1-206ENST00000557222 VHLLQ6RSH7 139 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 C6orf89Q6UWU4 347 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 C12orf54Q6X4T0 127 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 ZNF836Q6ZNA1 936 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 MSANTD1Q6ZTZ1 278 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 ZNF627Q7L945 461 aa7.47□□□□□ -1.21
VRK1-206ENST00000557222 SPATA21Q7Z572 469 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms