RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 PGCP20142 388 aa13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 DIO1P49895 249 aa13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 AP2S1P53680 142 aaPredicted RBP13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 PRTGQ2VWP7 1150 aa13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 CORO6Q6QEF8 472 aa13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 OR1L3Q8NH93 324 aa13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 TAAR8Q969N4 342 aa13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 ZNF775Q96BV0 537 aaPredicted RBP13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 ZNF69Q9UC07 566 aa13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 SLC22A13Q9Y226 551 aa13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 NME1P15531 152 aaKnown RBP13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 S1PR1P21453 382 aa13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 STOMP27105 288 aa13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 EVI2BP34910 448 aa13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 HTR2BP41595 481 aa13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 EFNB1P98172 346 aa13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 ZNF362Q5T0B9 420 aaPredicted RBP13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 OR8H3Q8N146 312 aa13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 ARIH2OSQ8N7S6 290 aa13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 OR10H5Q8NGA6 315 aa13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 ZNF431Q8TF32 576 aaPredicted RBP13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 DEDD2Q8WXF8 326 aa13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 CTHRC1Q96CG8 243 aa13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 OR6C1Q96RD1 312 aa13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 METTL7AQ9H8H3 244 aa13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 MRPS18AQ9NVS2 196 aaKnown RBP13.97□□□□□ -0.17
TMEM55B-207ENST00000557041 PRR19A6NJB7 356 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 FABP7O15540 132 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 GATBO75879 557 aaKnown RBP13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 SRFP11831 508 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 GDNFP39905 211 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 DNASE1L1P49184 302 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 PRKXP51817 358 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 RPL22L1Q6P5R6 122 aaKnown RBP13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 NUP54Q7Z3B4 507 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 TMED4Q7Z7H5 227 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 OR10AC1Q8NH08 325 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 KISS1RQ969F8 398 aaPredicted RBP13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 SMIM19Q96E16 107 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 GINS4Q9BRT9 223 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 MED18Q9BUE0 208 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 PHF7Q9BWX1 381 aaPredicted RBP13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 UBE2ZQ9H832 354 aaPredicted RBP13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 ZNF281Q9Y2X9 895 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 V9GY05 133 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 NPIPA5E9PKD4 350 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 SUSD5O60279 629 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 PTP4A3O75365 173 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 PITPNAQ00169 270 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 PRAMEF20Q5VT98 475 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 SLC35F3Q8IY50 421 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 PLPP7Q8NBV4 271 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 NAXEQ8NCW5 288 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 INTS14Q96SY0 518 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 ISYNA1Q9NPH2 558 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 NPIPA1Q9UND3 350 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 KIF26BQ2KJY2 2108 aa13.96□□□□□ -0.17
TMEM55B-207ENST00000557041 COL6A3P12111 3177 aa13.96□□□□□ -0.18
TMEM55B-207ENST00000557041 H2AFB2P0C5Z0 115 aa13.96□□□□□ -0.18
TMEM55B-207ENST00000557041 EPXP11678 715 aa13.96□□□□□ -0.18
TMEM55B-207ENST00000557041 ZNF81P51508 661 aa13.96□□□□□ -0.18
TMEM55B-207ENST00000557041 OR51D1Q8NGF3 324 aa13.96□□□□□ -0.18
TMEM55B-207ENST00000557041 PTPMT1Q8WUK0 201 aaPredicted RBP13.96□□□□□ -0.18
TMEM55B-207ENST00000557041 KCNK15Q9H427 330 aa13.96□□□□□ -0.18
TMEM55B-207ENST00000557041 PRDM9Q9NQV7 894 aa13.96□□□□□ -0.18
TMEM55B-207ENST00000557041 PPIEQ9UNP9 301 aaKnown RBP13.96□□□□□ -0.18
TMEM55B-207ENST00000557041 FARSAQ9Y285 508 aaKnown RBP13.96□□□□□ -0.18
TMEM55B-207ENST00000557041 TRAV18A0A075B6X5 111 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 LMO7DNF2Z398 122 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 PLPP2O43688 288 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 ADRB1P08588 477 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 S100A1P23297 94 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 PTCRAQ6ISU1 281 aaPredicted RBP13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 MAMDC2Q7Z304 686 aaPredicted RBP13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 CMTM4Q8IZR5 234 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 NPEPL1Q8NDH3 523 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 FAM46BQ96A09 425 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 NXPE2Q96DL1 559 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 SLC46A1Q96NT5 459 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 CMKLR1Q99788 373 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 LMF2Q9BU23 707 aaKnown RBP13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 IRF2BPLQ9H1B7 796 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 PPP1R3EQ9H7J1 279 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 ELL3Q9HB65 397 aaPredicted RBP13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 NRIP3Q9NQ35 241 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 INPP5EQ9NRR6 644 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 MGAT4AQ9UM21 535 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 FREM3P0C091 2139 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 PDCD5O14737 125 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 GLCEO94923 617 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 CFL1P23528 166 aaKnown RBP13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 POU3F1Q03052 451 aaPredicted RBP13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 PLAURQ03405 335 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 ZNF117Q03924 483 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 TRAM1Q15629 374 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 MDGA2Q7Z553 956 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 SNAPC3Q92966 411 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 MED29Q9NX70 200 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 ARPC1BO15143 372 aaKnown RBP13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 MPZL1O95297 269 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms