RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 LINC01590Q5TEZ4 76 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 ZCCHC12Q6PEW1 402 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 DPY19L2P2Q6ZN68 376 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 CFAP77Q6ZQR2 320 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 GLB1L2Q8IW92 636 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 GATSQ8NAP1 163 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 OR4C16Q8NGL9 310 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 RAB40AQ8WXH6 277 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 DVL3Q92997 716 aaPredicted RBP10.39□□□□□ -0.75
SRP54-213ENST00000556994 RERGQ96A58 199 aaPredicted RBP10.39□□□□□ -0.75
SRP54-213ENST00000556994 SLC22A18Q96BI1 424 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 CTHRC1Q96CG8 243 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 SPACA7Q96KW9 195 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 ZFYVE21Q9BQ24 234 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 B3GNT4Q9C0J1 378 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 CHST6Q9GZX3 395 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 SHARPINQ9H0F6 387 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 LRIT1Q9P2V4 623 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 OPN4Q9UHM6 478 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 MRM2Q9UI43 246 aaKnown RBP10.39□□□□□ -0.75
SRP54-213ENST00000556994 FBXL2Q9UKC9 423 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 SESN1Q9Y6P5 492 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 SPTBN5Q9NRC6 3674 aaKnown RBP10.39□□□□□ -0.75
SRP54-213ENST00000556994 TUBAL3A6NHL2 446 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 DCTN6O00399 190 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 BET1O15155 118 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 RDH16O75452 317 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 RBBP9O75884 186 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 GLCEO94923 617 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 GPANK1O95872 356 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 IGF2P01344 180 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 IFNA16P05015 189 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 ANXA2P07355 339 aaKnown RBP10.39□□□□□ -0.75
SRP54-213ENST00000556994 FBXO45P0C2W1 286 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 ADPRHP54922 357 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 MAZP56270 477 aaKnown RBP10.39□□□□□ -0.75
SRP54-213ENST00000556994 GPR18Q14330 331 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 Q499Y3 187 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 RNF44Q7L0R7 432 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 RTL10Q7L3V2 364 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 SLC36A1Q7Z2H8 476 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 CA13Q8N1Q1 262 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 MUC20Q8N307 709 aaPredicted RBP10.39□□□□□ -0.75
SRP54-213ENST00000556994 EID2Q8N6I1 236 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 C10orf53Q8N6V4 93 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 RCBTB1Q8NDN9 531 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 OR8S1Q8NH09 359 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 OR4C3Q8NH37 302 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 PHYHIPQ92561 330 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 PNPLA2Q96AD5 504 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 TOE1Q96GM8 510 aaKnown RBP10.39□□□□□ -0.75
SRP54-213ENST00000556994 PAWRQ96IZ0 340 aaKnown RBP10.39□□□□□ -0.75
SRP54-213ENST00000556994 PLA2G2FQ9BZM2 168 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 NMNAT2Q9BZQ4 307 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 LYRM4Q9HD34 91 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 ACTR10Q9NZ32 417 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 PFDN2Q9UHV9 154 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 IKZF2Q9UKS7 526 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 MOKQ9UQ07 419 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 SPACA6W5XKT8 324 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 TRANK1O15050 2925 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 SNRPGP15A8MWD9 76 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 KCNJ13O60928 360 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 CTNSO60931 367 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 UPK3AO75631 287 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 GLSO94925 669 aaPredicted RBP10.38□□□□□ -0.75
SRP54-213ENST00000556994 SPDEFO95238 335 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 IL5P05113 134 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 F13BP05160 661 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 CALCBP10092 127 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 GABRA1P14867 456 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 MYOGP15173 224 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 PPP1CAP62136 330 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 BAMBIQ13145 260 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 ALKBH1Q13686 389 aaKnown RBP10.38□□□□□ -0.75
SRP54-213ENST00000556994 DEFB110Q30KQ9 67 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 ZNF684Q5T5D7 378 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 LRRTM1Q86UE6 522 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 ZNF761Q86XN6 746 aaPredicted RBP10.38□□□□□ -0.75
SRP54-213ENST00000556994 OR51D1Q8NGF3 324 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 STK35Q8TDR2 534 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 TMPRSS13Q9BYE2 586 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 SLITRK2Q9H156 845 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 TMEM138Q9NPI0 162 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 ZC4H2Q9NQZ6 224 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 GPR160Q9UJ42 338 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 KIAA0100Q14667 2235 aaKnown RBP10.38□□□□□ -0.75
SRP54-213ENST00000556994 A0A087WUJ7 227 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 UBE2QL1A1L167 161 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 OR6C65A6NJZ3 312 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 SMAD9O15198 467 aaKnown RBP10.38□□□□□ -0.75
SRP54-213ENST00000556994 RAD1O60671 282 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 CSTAP01040 98 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 S1PR1P21453 382 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 DLX5P56178 289 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 IL10RAQ13651 578 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 ERV3-1Q14264 604 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 KIR2DS3Q14952 304 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 IQCF2Q8IXL9 164 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 RELL2Q8NC24 303 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms