RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 BOD1Q96IK1 185 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 PRRC1Q96M27 445 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 OR2M2Q96R28 347 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 CCL19Q99731 98 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 PIP5K1AQ99755 562 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 NANSQ9NR45 359 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 SLC17A5Q9NRA2 495 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 TAGLN3Q9UI15 199 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 RIMS3Q9UJD0 308 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 ZNF229Q9UJW7 825 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 MAGED1Q9Y5V3 778 aaPredicted RBP10.12□□□□□ -0.79
SLIRP-205ENST00000556310 MED13LQ71F56 2210 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 ALPK2Q86TB3 2170 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 DPRXA6NFQ7 191 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 RPL36A-HNRNPH2H7BZ11 118 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 CLOCKO15516 846 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 ZNF682O95780 498 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 CH25HO95992 272 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 SERPINA1P01009 418 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 MT-ND1P03886 318 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 IFNW1P05000 195 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 ASAH2BP0C7U1 165 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 ADORA3P0DMS8 318 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 HLA-DOBP13765 273 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 IFNA8P32881 189 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 UGT2B15P54855 530 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 SLC25A3Q00325 362 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 ROR2Q01974 943 aaKnown RBP10.11□□□□□ -0.79
SLIRP-205ENST00000556310 IFI44LQ53G44 452 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 HMBOX1Q6NT76 420 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 KLHL17Q6TDP4 642 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 TMEM108Q6UXF1 575 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 LINGO2Q7L985 606 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 SLC46A3Q7Z3Q1 461 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 PXKQ7Z7A4 578 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 NKAIN4Q8IVV8 208 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 OFCC1Q8IZS5 231 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 GPR137CQ8N3F9 429 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 ZNF611Q8N823 705 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 WDR31Q8NA23 367 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 PIK3C3Q8NEB9 887 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 KBTBD8Q8NFY9 601 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 OR1K1Q8NGR3 316 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 TMEM255BQ8WV15 326 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 TMEM239Q8WW34 195 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 AKAP1Q92667 903 aaKnown RBP eCLIP10.11□□□□□ -0.79
SLIRP-205ENST00000556310 FAM162AQ96A26 154 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 HSH2DQ96JZ2 352 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 HS6ST2Q96MM7 605 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 CCT8L2Q96SF2 557 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 OBP2BQ9NPH6 170 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 MEPEQ9NQ76 525 aaPredicted RBP10.11□□□□□ -0.79
SLIRP-205ENST00000556310 ARL8BQ9NVJ2 186 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 ADA2Q9NZK5 511 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 A4GNTQ9UNA3 340 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 VPS13CQ709C8 3753 aa10.11□□□□□ -0.79
SLIRP-205ENST00000556310 HEATR1Q9H583 2144 aaKnown RBP10.1□□□□□ -0.79
SLIRP-205ENST00000556310 A0A1W2PR80 420 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 ABCD4O14678 606 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 TMCC2O75069 709 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 OR6A2O95222 327 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 FAM107AO95990 144 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 WNT11O96014 354 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 NCK1P16333 377 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 CDH2P19022 906 aaPredicted RBP10.1□□□□□ -0.79
SLIRP-205ENST00000556310 AHCYP23526 432 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 PTAFRP25105 342 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 ZNF83P51522 516 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 ST3GAL3Q11203 375 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 ZP4Q12836 540 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 FXNQ16595 210 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 TBRG1Q3YBR2 411 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 ZNF672Q499Z4 452 aaPredicted RBP10.1□□□□□ -0.79
SLIRP-205ENST00000556310 HIKESHIQ53FT3 197 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 GKAP1Q5VSY0 366 aaPredicted RBP10.1□□□□□ -0.79
SLIRP-205ENST00000556310 NHLRC1Q6VVB1 395 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 NANOGNBQ7Z5D8 188 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 PGAM4Q8N0Y7 254 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 PFN4Q8NHR9 129 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 MAGEE2Q8TD90 523 aaPredicted RBP10.1□□□□□ -0.79
SLIRP-205ENST00000556310 IGFBPL1Q8WX77 278 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 FBXW5Q969U6 566 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 MED29Q9NX70 200 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 NDE1Q9NXR1 346 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 RPS6KA6Q9UK32 745 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 MGAT4BQ9UQ53 548 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 MED31Q9Y3C7 131 aa10.1□□□□□ -0.79
SLIRP-205ENST00000556310 MTORP42345 2549 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 ZNF469Q96JG9 3925 aaPredicted RBP10.09□□□□□ -0.79
SLIRP-205ENST00000556310 ARPC4-TTLL3A0A0A6YYG9 625 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 SLC35F4A4IF30 521 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 HTR3EA5X5Y0 456 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 SHISA9B4DS77 424 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 C11orf98E9PRG8 122 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 M0R1B8 84 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 SMPD2O60906 423 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 SERPINI2O75830 405 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 OR7A10O76100 309 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 HIST1H2ABP04908 130 aa10.09□□□□□ -0.79
SLIRP-205ENST00000556310 UMPSP11172 480 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms