RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 MTFR2Q6P444 385 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 PLXDC2Q6UX71 529 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 THSD4Q6ZMP0 1018 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 C3P1Q6ZMU1 363 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 SLC35D2Q76EJ3 337 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 FAM214BQ7L5A3 538 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 HDDC2Q7Z4H3 204 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 GALNT5Q7Z7M9 940 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 TUSC5Q8IXB3 177 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 GALNT4Q8N4A0 578 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 ZIC4Q8N9L1 334 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 OR2T33Q8NG76 320 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 NRG4Q8WWG1 115 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 RND1Q92730 232 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 TMEM45BQ96B21 275 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 ADAD1Q96M93 576 aaKnown RBP11.09□□□□□ -0.63
SHMT2-221ENST00000555773 DMRTA2Q96SC8 542 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 IFT27Q9BW83 186 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 GABARAPL3Q9BY60 117 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 ENKD1Q9H0I2 346 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 EGLN3Q9H6Z9 239 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 TBC1D23Q9NUY8 699 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 GRHPRQ9UBQ7 328 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 RCE1Q9Y256 329 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 EMC9Q9Y3B6 208 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 ZGRF1Q86YA3 2104 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 SHANK1Q9Y566 2161 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 A6NIZ1 184 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 OR6C65A6NJZ3 312 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 ZNF726A6NNF4 738 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 CENPBD1B2RD01 187 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 KDM4EB2RXH2 506 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-221ENST00000555773 MCIDASD6RGH6 385 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 CCL21O00585 134 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 TRAF3IP2O43734 574 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-221ENST00000555773 MRPL33O75394 65 aaKnown RBP11.08□□□□□ -0.64
SHMT2-221ENST00000555773 TOXO94900 526 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 SOX14O95416 240 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 IL18BPO95998 194 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 IGHMP01871 453 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 HMGN1P05114 100 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 TMIGD3P0DMS9 266 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-221ENST00000555773 IFNGR1P15260 489 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 GNLYP22749 145 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 CTSSP25774 331 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 SMSP52788 366 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 RAP1BP61224 184 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 RPL27P61353 136 aaKnown RBP11.08□□□□□ -0.64
SHMT2-221ENST00000555773 RAP1AP62834 184 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 ERVK-25P63136 954 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 CDK5Q00535 292 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 GINS1Q14691 196 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 PTGES3Q15185 160 aaKnown RBP11.08□□□□□ -0.64
SHMT2-221ENST00000555773 ACKR1Q16570 336 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 FBXW10Q5XX13 1052 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 SLC27A4Q6P1M0 643 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 AAED1Q7RTV5 226 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 LNX2Q8N448 690 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 ARIH2OSQ8N7S6 290 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 OR6X1Q8NH79 312 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 PRR7Q8TB68 274 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 INTS12Q96CB8 462 aaKnown RBP11.08□□□□□ -0.64
SHMT2-221ENST00000555773 TXNDC15Q96J42 360 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 KATNB1Q9BVA0 655 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 POLDIP3Q9BY77 421 aaKnown RBP11.08□□□□□ -0.64
SHMT2-221ENST00000555773 PLA2G12AQ9BZM1 189 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 SMPD3Q9NY59 655 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-221ENST00000555773 ZNF629Q9UEG4 869 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-221ENST00000555773 SH3BGRL2Q9UJC5 107 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 ZNF346Q9UL40 294 aaKnown RBP11.08□□□□□ -0.64
SHMT2-221ENST00000555773 NOSIPQ9Y314 301 aaKnown RBP11.08□□□□□ -0.64
SHMT2-221ENST00000555773 IER3IP1Q9Y5U9 82 aa11.08□□□□□ -0.64
SHMT2-221ENST00000555773 SMG1Q96Q15 3661 aaKnown RBP11.08□□□□□ -0.64
SHMT2-221ENST00000555773 BHLHE40O14503 412 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 AHCYL1O43865 530 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 SERPINI2O75830 405 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 ZNF432O94892 652 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 IGFBP1P08833 259 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-221ENST00000555773 NOS3P29474 1203 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 AGTR1P30556 359 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 SDHAP31040 664 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 OPRM1P35372 400 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 KIR2DL2P43627 348 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-221ENST00000555773 CLDN17P56750 224 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 MYBPC1Q00872 1141 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 SNCBQ16143 134 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 C4orf17Q53FE4 359 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 CLEC12AQ5QGZ9 265 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 ARMC4Q5T2S8 1044 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 FAM122BQ7Z309 247 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 IGFN1Q86VF2 1251 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 RPRMLQ8N4K4 120 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 MARVELD2Q8N4S9 558 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 OR8D4Q8NGM9 314 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 OR6K3Q8NGY3 331 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 FNDC8Q8TC99 324 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 ZNF775Q96BV0 537 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-221ENST00000555773 SLC25A44Q96H78 314 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-221ENST00000555773 LRR1Q96L50 414 aa11.07□□□□□ -0.64
SHMT2-221ENST00000555773 ERMAPQ96PL5 475 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms