RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 CBR1P16152 277 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 CDH2P19022 906 aaPredicted RBP10.32□□□□□ -0.76
VRK1-204ENST00000555351 ARR3P36575 388 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 RBM34P42696 430 aaKnown RBP10.32□□□□□ -0.76
VRK1-204ENST00000555351 ARF1P84077 181 aaKnown RBP10.32□□□□□ -0.76
VRK1-204ENST00000555351 LGALS3BPQ08380 585 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 SPOCK1Q08629 439 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 RABL3Q5HYI8 236 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 REP15Q6BDI9 236 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 TTC33Q6PID6 262 aaPredicted RBP10.32□□□□□ -0.76
VRK1-204ENST00000555351 B3GLCTQ6Y288 498 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 ARPINQ7Z6K5 226 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 C20orf196Q8IYI0 205 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 OR4F15Q8NGB8 312 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 RNF217Q8TC41 542 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 PROX1Q92786 737 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 ZNF583Q96ND8 569 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 MOGAT1Q96PD6 335 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 KCNS3Q9BQ31 491 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 C1QTNF6Q9BXI9 259 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 CACNG6Q9BXT2 260 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 CRLF2Q9HC73 371 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 ZNF229Q9UJW7 825 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 CAPN7Q9Y6W3 813 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 PMF1-BGLAPU3KQ54 211 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 ZFHX3Q15911 3703 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 ZNF726A6NNF4 738 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 ATP8B1O43520 1251 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 THY1P04216 161 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 CSF3P09919 207 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 ACVR1BP36896 505 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 CRYBA2P53672 197 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 IL1RL1Q01638 556 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 NAAAQ02083 359 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 POU3F1Q03052 451 aaPredicted RBP10.31□□□□□ -0.76
VRK1-204ENST00000555351 RAB35Q15286 201 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 ZNF74Q16587 644 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 SWI5Q1ZZU3 235 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 CEACAM16Q2WEN9 425 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 C10orf53Q8N6V4 93 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 NUP37Q8NFH4 326 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 OR4D11Q8NGI4 311 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 RP9Q8TA86 221 aaKnown RBP10.31□□□□□ -0.76
VRK1-204ENST00000555351 C10orf82Q8WW14 230 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 RHNO1Q9BSD3 238 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 REG4Q9BYZ8 158 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 NANSQ9NR45 359 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 FBXL3Q9UKT7 428 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 SLC7A7Q9UM01 511 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 USP22Q9UPT9 525 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 MOKQ9UQ07 419 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 ATP23Q9Y6H3 246 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 USF3Q68DE3 2245 aa10.31□□□□□ -0.76
VRK1-204ENST00000555351 PLCE1Q9P212 2302 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 SLC35F4A4IF30 521 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 CPSF4LA6NMK7 179 aaKnown RBP10.3□□□□□ -0.76
VRK1-204ENST00000555351 VSTM5A8MXK1 200 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 FAM220BPB1ANY3 271 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 CENPBD1B2RD01 187 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 ATP6V1G2-DDX39BF2Z307 99 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 SMAD7O15105 426 aaKnown RBP10.3□□□□□ -0.76
VRK1-204ENST00000555351 MGRN1O60291 552 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 CCDC22O60826 627 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 OR5F1O95221 314 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 OR6A2O95222 327 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 HIST1H2ABP04908 130 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 ASAH2BP0C7U1 165 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 CECR9P0C854 216 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 ADORA3P0DMS8 318 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 KDELR2P33947 212 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 MDH1P40925 334 aaKnown RBP10.3□□□□□ -0.76
VRK1-204ENST00000555351 EFNA4P52798 201 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 NUDT6P53370 316 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 GUCY1A3Q02108 690 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 EFNB3Q15768 340 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 CLEC2AQ6UVW9 174 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 WDR88Q6ZMY6 472 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 HIST3H2AQ7L7L0 130 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 LSRQ86X29 649 aaPredicted RBP10.3□□□□□ -0.76
VRK1-204ENST00000555351 RBM45Q8IUH3 476 aaKnown RBP10.3□□□□□ -0.76
VRK1-204ENST00000555351 OR10H5Q8NGA6 315 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 OR6X1Q8NH79 312 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 VANGL1Q8TAA9 524 aaPredicted RBP10.3□□□□□ -0.76
VRK1-204ENST00000555351 LIPHQ8WWY8 451 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 HIST1H2ACQ93077 130 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 PRSS27Q9BQR3 290 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 ZNF442Q9H7R0 627 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 CA10Q9NS85 328 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 B3GNT2Q9NY97 397 aa10.3□□□□□ -0.76
VRK1-204ENST00000555351 GDF2Q9UK05 429 aaPredicted RBP10.3□□□□□ -0.76
VRK1-204ENST00000555351 A0A096LPE4 126 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 LOC100653049A0A140TA62 436 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 A0A1W2PPZ6 126 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 B9A039 149 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 RNF223E7ERA6 249 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 LRRN3E7EW58 273 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 M0R3G1 203 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 NDUFAB1O14561 156 aa10.29□□□□□ -0.76
VRK1-204ENST00000555351 TLX2O43763 284 aaPredicted RBP10.29□□□□□ -0.76
VRK1-204ENST00000555351 NDUFS7O75251 213 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms