RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 CLDN22Q8N7P3 220 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 APH1AQ96BI3 265 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 ADAD1Q96M93 576 aaKnown RBP12.67□□□□□ -0.38
CHD8-208ENST00000555301 GPX7Q96SL4 187 aaPredicted RBP12.67□□□□□ -0.38
CHD8-208ENST00000555301 UCK2Q9BZX2 261 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 GABARAPL1Q9H0R8 117 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 OR52D1Q9H346 318 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 C12orf49Q9H741 205 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 DCLRE1BQ9H816 532 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 STX18Q9P2W9 335 aaKnown RBP12.67□□□□□ -0.38
CHD8-208ENST00000555301 MAGED1Q9Y5V3 778 aaPredicted RBP12.67□□□□□ -0.38
CHD8-208ENST00000555301 CDH10Q9Y6N8 788 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 ZGRF1Q86YA3 2104 aa12.67□□□□□ -0.38
CHD8-208ENST00000555301 CLEC18AA5D8T8 446 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 ZNF726A6NNF4 738 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 EEF1E1-BLOC1S5C9J1V9 151 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 MCIDASD6RGH6 385 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 EEF1E1O43324 174 aaKnown RBP12.66□□□□□ -0.38
CHD8-208ENST00000555301 CLDN14O95500 239 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 CNOT4O95628 575 aaKnown RBP12.66□□□□□ -0.38
CHD8-208ENST00000555301 CD14P08571 375 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 SLC6A6P31641 620 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 CTXN1P60606 82 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 ACKR1Q16570 336 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 NIPAL3Q6P499 406 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 FAHD1Q6P587 224 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 CLEC18BQ6UXF7 455 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 TFAP2EQ6VUC0 442 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 DPY19L2P2Q6ZN68 376 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 LRRC75AQ8NAA5 344 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 RELL2Q8NC24 303 aaPredicted RBP12.66□□□□□ -0.38
CHD8-208ENST00000555301 CLEC18CQ8NCF0 446 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 OR52L1Q8NGH7 329 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 OR6X1Q8NH79 312 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 SSC4DQ8WTU2 575 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 LRRC46Q96FV0 321 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 POLDIP3Q9BY77 421 aaKnown RBP12.66□□□□□ -0.38
CHD8-208ENST00000555301 TXNIPQ9H3M7 391 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 KCNJ16Q9NPI9 418 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 MED29Q9NX70 200 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 IL20Q9NYY1 176 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 JKAMPQ9P055 326 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 NBASA2RRP1 2371 aa12.66□□□□□ -0.38
CHD8-208ENST00000555301 GTF3C1Q12789 2109 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 RP1L1Q8IWN7 2480 aaPredicted RBP12.65□□□□□ -0.38
CHD8-208ENST00000555301 SLC35F4A4IF30 521 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 SAC3D1A6NKF1 404 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 A8MXE2 369 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 SLC43A1O75387 559 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 ZNF432O94892 652 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 IGHMP01871 453 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 APEHP13798 732 aaKnown RBP12.65□□□□□ -0.38
CHD8-208ENST00000555301 ANPEPP15144 967 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 ZNF26P17031 533 aaPredicted RBP12.65□□□□□ -0.38
CHD8-208ENST00000555301 NTF4P34130 210 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 SELENOPP49908 381 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 ASCL1P50553 236 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 RPS6KA3P51812 740 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 BIDP55957 195 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 FXYD6P3P58550 94 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 SRSF1Q07955 248 aaKnown RBP eCLIP12.65□□□□□ -0.38
CHD8-208ENST00000555301 FAM205BPQ63HN1 556 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 KLHL17Q6TDP4 642 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 THSD4Q6ZMP0 1018 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 BEND4Q6ZU67 534 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 LUZP2Q86TE4 346 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 IGFN1Q86VF2 1251 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 ZNF610Q8N9Z0 462 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 POMGNT2Q8NAT1 580 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 TXNDC15Q96J42 360 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 OR2M2Q96R28 347 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 RBM4BQ9BQ04 359 aaKnown RBP12.65□□□□□ -0.38
CHD8-208ENST00000555301 C9orf16Q9BUW7 83 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 KATNB1Q9BVA0 655 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 RBM4Q9BWF3 364 aaKnown RBP12.65□□□□□ -0.38
CHD8-208ENST00000555301 OPN3Q9H1Y3 402 aaPredicted RBP12.65□□□□□ -0.38
CHD8-208ENST00000555301 SLCO5A1Q9H2Y9 848 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 NRIP3Q9NQ35 241 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 PAPOLBQ9NRJ5 636 aaKnown RBP12.65□□□□□ -0.38
CHD8-208ENST00000555301 GRHPRQ9UBQ7 328 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 POFUT2Q9Y2G5 429 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 ESPL1Q14674 2120 aa12.65□□□□□ -0.38
CHD8-208ENST00000555301 A6NIZ1 184 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 FAM90A27PA6NNH2 459 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 CENPBD1B2RD01 187 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 H3BN98 237 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 OSMP13725 252 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 DAPP51397 102 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 RAP1BP61224 184 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 RPL27P61353 136 aaKnown RBP12.64□□□□□ -0.39
CHD8-208ENST00000555301 RAP1AP62834 184 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 ERVK-25P63136 954 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 MELKQ14680 651 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 FBXL19-AS1Q494R0 122 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 ARMC4Q5T2S8 1044 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 FBXW9Q5XUX1 488 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 KDM4DQ6B0I6 523 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 GPR139Q6DWJ6 353 aa12.64□□□□□ -0.39
CHD8-208ENST00000555301 ABHD12BQ7Z5M8 362 aaPredicted RBP12.64□□□□□ -0.39
CHD8-208ENST00000555301 KIF18BQ86Y91 864 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms