RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 CORINQ9Y5Q5 1042 aa9.61□□□□□ -0.87
TDP1-211ENST00000555178 POLEQ07864 2286 aa9.61□□□□□ -0.87
TDP1-211ENST00000555178 HTR3EA5X5Y0 456 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 TTLL8A6PVC2 850 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 SLC1A7O00341 560 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 FZD7O75084 574 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 AQP8O94778 261 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 TGM6O95932 706 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 GYPBP06028 91 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 LYNP07948 512 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 CD14P08571 375 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 ACKR1Q16570 336 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 MESTQ5EB52 335 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 PLBD1Q6P4A8 553 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 NHLRC1Q6VVB1 395 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 DEPDC4Q8N2C3 294 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 SCAIQ8N9R8 606 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 OR52E2Q8NGJ4 325 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 OR6S1Q8NH40 331 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 OR2V1Q8NHB1 315 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 TMEM163Q8TC26 289 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 TXNDC15Q96J42 360 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 SLC38A2Q96QD8 506 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 NMNAT3Q96T66 252 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 ING1Q9UK53 422 aaPredicted RBP9.6□□□□□ -0.87
TDP1-211ENST00000555178 ZNF346Q9UL40 294 aaKnown RBP9.6□□□□□ -0.87
TDP1-211ENST00000555178 OR6A2O95222 327 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 APOL3O95236 402 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 EDNRAP25101 427 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 GRK5P34947 590 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 CDKN2AP42771 156 aaKnown RBP9.6□□□□□ -0.87
TDP1-211ENST00000555178 CLK1P49759 484 aaKnown RBP9.6□□□□□ -0.87
TDP1-211ENST00000555178 H3F3AP84243 136 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 ESPNLQ6ZVH7 1005 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 CPOQ8IVL8 374 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 SLC37A3Q8NCC5 494 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 OR8J1Q8NGP2 316 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 OR9Q1Q8NGQ5 310 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 FNDC9Q8TBE3 224 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 ZNRF4Q8WWF5 429 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 EMC6Q9BV81 110 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 CMC2Q9NRP2 79 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 INIPQ9NRY2 104 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 CLEC4AQ9UMR7 237 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 TRAPPC4Q9Y296 219 aa9.6□□□□□ -0.87
TDP1-211ENST00000555178 OR6C68A6NDL8 312 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 AQP7P3A6NL99 342 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 GJE1A6NN92 205 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 AQP7O14520 342 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 ACTL6AO96019 429 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 CRYABP02511 175 aaKnown RBP9.59□□□□□ -0.87
TDP1-211ENST00000555178 ADRA2AP08913 450 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 IFNGR1P15260 489 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 SDHAP31040 664 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 CARD18P57730 90 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 SLC35A1P78382 337 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 MVKQ03426 396 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.59□□□□□ -0.87
TDP1-211ENST00000555178 INAQ16352 499 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 RTL6Q6ICC9 239 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 ARHGAP11AQ6P4F7 1023 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 PAQR6Q6TCH4 344 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.59□□□□□ -0.87
TDP1-211ENST00000555178 OR51L1Q8NGJ5 315 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 ABHD3Q8WU67 409 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 PLEKHA8Q96JA3 519 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 ZNF582Q96NG8 517 aaPredicted RBP9.59□□□□□ -0.87
TDP1-211ENST00000555178 TSSK2Q96PF2 358 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 NR1H4Q96RI1 486 aaPredicted RBP9.59□□□□□ -0.87
TDP1-211ENST00000555178 B3GALT5Q9Y2C3 310 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 HSPE1-MOB4S4R3N1 261 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 HIVEP3Q5T1R4 2406 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 FLNCQ14315 2725 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 A0A1W2PNV4 684 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 CPN1P15169 458 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 CRHBPP24387 322 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 SNRPGP62308 76 aaKnown RBP9.59□□□□□ -0.87
TDP1-211ENST00000555178 KRR1Q13601 381 aaKnown RBP9.59□□□□□ -0.87
TDP1-211ENST00000555178 MFSD13AQ14CX5 517 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 PON3Q15166 354 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 ZNF239Q16600 458 aaKnown RBP9.59□□□□□ -0.87
TDP1-211ENST00000555178 LEG1Q6P5S2 330 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 SEM1Q6ZVN7 128 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 CXXC5Q7LFL8 322 aaKnown RBP9.59□□□□□ -0.87
TDP1-211ENST00000555178 NPEPL1Q8NDH3 523 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 PTP4A1Q93096 173 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 PRDM14Q9GZV8 571 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 GRHPRQ9UBQ7 328 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 MYRFQ9Y2G1 1151 aa9.59□□□□□ -0.87
TDP1-211ENST00000555178 RIIAD1A6NNX1 92 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 CLCA1A8K7I4 914 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 FAM171A2A8MVW0 826 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 PTGES3LE9PB15 166 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 DCTN6O00399 190 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 ARPC3O15145 178 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 TRAF3IP2O43734 574 aaPredicted RBP9.58□□□□□ -0.88
TDP1-211ENST00000555178 FAM20BO75063 409 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 HMGN1P05114 100 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 HTR1AP08908 422 aa9.58□□□□□ -0.88
TDP1-211ENST00000555178 SMIM18P0DKX4 95 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms