RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 METTL15A6NJ78 407 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 SHISA7A6NL88 538 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 FOXE1O00358 373 aaPredicted RBP6.4□□□□□ -1.39
SYNE2-216ENST00000555002 GAPDHSO14556 408 aaPredicted RBP6.4□□□□□ -1.39
SYNE2-216ENST00000555002 PTBP3O95758 552 aaKnown RBP6.4□□□□□ -1.39
SYNE2-216ENST00000555002 OR8G3PP0DMU2 310 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 ITGAMP11215 1152 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 ICAM2P13598 275 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 FDXRP22570 491 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 HOXD12P35452 270 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 HMGCLP35914 325 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 NCCRP1Q6ZVX7 275 aaPredicted RBP6.4□□□□□ -1.39
SYNE2-216ENST00000555002 TCTE3Q8IZS6 198 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 PNPLA1Q8N8W4 532 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 UTP4Q969X6 686 aaKnown RBP6.4□□□□□ -1.39
SYNE2-216ENST00000555002 IMP4Q96G21 291 aaKnown RBP6.4□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF582Q96NG8 517 aaPredicted RBP6.4□□□□□ -1.39
SYNE2-216ENST00000555002 AMBRA1Q9C0C7 1298 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 XYLT2Q9H1B5 865 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 HHLA2Q9UM44 414 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 TRAPPC2P0DI81 140 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 TRAPPC2BP0DI82 140 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 IL4RP24394 825 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 DCDP81605 110 aaKnown RBP6.4□□□□□ -1.39
SYNE2-216ENST00000555002 TMEM244Q5VVB8 128 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF546Q86UE3 836 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 BPIFB2Q8N4F0 458 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 NHLRC2Q8NBF2 726 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 OR52B6Q8NGF0 335 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 ADIPOR1Q96A54 375 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 P2RY12Q9H244 342 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 CDCP1Q9H5V8 836 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 NT5DC2Q9H857 520 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 GGT1P19440 569 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 CD38P28907 300 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 DPPA2Q7Z7J5 298 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 LSMEM2Q8N112 164 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 SVBPQ8N300 66 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 GMLQ99445 158 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 SOX7Q9BT81 388 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 OR52A5Q9H2C5 316 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 FANCMQ8IYD8 2048 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 TIMP1P01033 207 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 SULT1A3P0DMM9 295 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 SULT1A4P0DMN0 295 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 OR13C7P0DN81 318 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 PAGE3Q5JUK9 113 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 TSEN54Q7Z6J9 526 aaKnown RBP6.4□□□□□ -1.39
SYNE2-216ENST00000555002 RHEBL1Q8TAI7 183 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 NETO1Q8TDF5 533 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 MUL1Q969V5 352 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 SLC41A2Q96JW4 573 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 NIPAL2Q9H841 368 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 AIG1Q9NVV5 245 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 MRPS28Q9Y2Q9 187 aaKnown RBP6.4□□□□□ -1.39
SYNE2-216ENST00000555002 TIMM9Q9Y5J7 89 aa6.4□□□□□ -1.39
SYNE2-216ENST00000555002 P2RY10O00398 339 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ATXN1LP0C7T5 689 aaKnown RBP6.39□□□□□ -1.39
SYNE2-216ENST00000555002 CPMP14384 443 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ENPP1P22413 925 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ITGB7P26010 798 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 SLC5A2P31639 672 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 NPY4RP50391 375 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 RAB15P59190 212 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 RPS16P62249 146 aaKnown RBP6.39□□□□□ -1.39
SYNE2-216ENST00000555002 MARCH8Q5T0T0 291 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 LGALS14Q8TCE9 139 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ASB17Q8WXJ9 295 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 NTMT1Q9BV86 223 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ARHGAP39Q9C0H5 1083 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 DEFB127Q9H1M4 99 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 RBPJLQ9UBG7 517 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 MRPS2Q9Y399 296 aaKnown RBP6.39□□□□□ -1.39
SYNE2-216ENST00000555002 P2RX6O15547 441 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 SSSCA1O60232 199 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 PSMB5P28074 263 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 PTCRAQ6ISU1 281 aaPredicted RBP6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ANKRD16Q6P6B7 361 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 MINDY1Q8N5J2 469 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF420Q8TAQ5 688 aaPredicted RBP6.39□□□□□ -1.39
SYNE2-216ENST00000555002 TMEM230Q96A57 120 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ELP4Q96EB1 424 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF597Q96LX8 424 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 FAM212BQ9NTI7 297 aaPredicted RBP6.39□□□□□ -1.39
SYNE2-216ENST00000555002 SLC35D1Q9NTN3 355 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 V9GY05 133 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ABCC6O95255 1503 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 PRAMEF25A6NGN4 478 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 GPR37O15354 613 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 CPEP16870 476 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 WNT4P56705 351 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ADPRMQ3LIE5 342 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 RAB6CQ53S08 254 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 PRAMEF5Q5TYX0 476 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 PRAMEF6Q5VXH4 476 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 SLC6A19Q695T7 634 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 OR51H1Q8NH63 302 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 FGGYQ96C11 551 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ARSGQ96EG1 525 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 SIX2Q9NPC8 291 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms