RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 SNPHO15079 494 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 PLPP2O43688 288 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 CD1AP06126 327 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 BMP4P12644 408 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 TCN2P20062 427 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 GRPRP30550 384 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 RCVRNP35243 200 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 RPS19P39019 145 aaKnown RBP8.01□□□□□ -1.13
TDP1-210ENST00000554976 FOXK1P85037 733 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 TIMM50Q3ZCQ8 353 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 EEF1A1P5Q5VTE0 462 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 GPR139Q6DWJ6 353 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 LYPD4Q6UWN0 246 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 DHRS13Q6UX07 377 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 BTLAQ7Z6A9 289 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 FAM98AQ8NCA5 519 aaKnown RBP8.01□□□□□ -1.13
TDP1-210ENST00000554976 KBTBD8Q8NFY9 601 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 TMEM41AQ96HV5 264 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 MFRPQ9BY79 579 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 CDCP1Q9H5V8 836 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 H2AFY2Q9P0M6 372 aaPredicted RBP8.01□□□□□ -1.13
TDP1-210ENST00000554976 PPP4R1LQ9P1A2 415 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 B3GAT1Q9P2W7 334 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 SPIN1Q9Y657 262 aaPredicted RBP8.01□□□□□ -1.13
TDP1-210ENST00000554976 FREM2Q5SZK8 3169 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 SELENOFO60613 162 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 MRPL3P09001 348 aaKnown RBP8.01□□□□□ -1.13
TDP1-210ENST00000554976 OR2T7P0C7T2 308 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 PAICSP22234 425 aaKnown RBP8.01□□□□□ -1.13
TDP1-210ENST00000554976 ADH6P28332 368 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 PTGS2P35354 604 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 HCCSP53701 268 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 ACTC1P68032 377 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 ACTA1P68133 377 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 SF3B4Q15427 424 aaKnown RBP eCLIP8.01□□□□□ -1.132e-7■■■■■ 32.9
TDP1-210ENST00000554976 TRIP6Q15654 476 aaKnown RBP8.01□□□□□ -1.13
TDP1-210ENST00000554976 DMKNQ6E0U4 476 aaPredicted RBP8.01□□□□□ -1.13
TDP1-210ENST00000554976 LEG1Q6P5S2 330 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 CDC20BQ86Y33 519 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 OR6V1Q8N148 313 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 OR2T27Q8NH04 317 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 UFD1Q92890 307 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 CNN2Q99439 309 aaKnown RBP8.01□□□□□ -1.13
TDP1-210ENST00000554976 GPR87Q9BY21 358 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 OR51V1Q9H2C8 321 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 TXNIPQ9H3M7 391 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 BABAM2Q9NXR7 383 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 KLRF1Q9NZS2 232 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 MOKQ9UQ07 419 aa8.01□□□□□ -1.13
TDP1-210ENST00000554976 IGLV1-36A0A0B4J1U3 117 aa8□□□□□ -1.13
TDP1-210ENST00000554976 DVL2O14641 736 aa8□□□□□ -1.13
TDP1-210ENST00000554976 OGG1O15527 345 aa8□□□□□ -1.13
TDP1-210ENST00000554976 RNF13O43567 381 aa8□□□□□ -1.13
TDP1-210ENST00000554976 ABHD16AO95870 558 aa8□□□□□ -1.13
TDP1-210ENST00000554976 HLA-DOBP13765 273 aa8□□□□□ -1.13
TDP1-210ENST00000554976 LIFP15018 202 aa8□□□□□ -1.13
TDP1-210ENST00000554976 CD53P19397 219 aa8□□□□□ -1.13
TDP1-210ENST00000554976 RPL4P36578 427 aaKnown RBP8□□□□□ -1.13
TDP1-210ENST00000554976 SSR4P51571 173 aa8□□□□□ -1.13
TDP1-210ENST00000554976 B3GALT5-AS1P59052 145 aa8□□□□□ -1.13
TDP1-210ENST00000554976 KRR1Q13601 381 aaKnown RBP8□□□□□ -1.13
TDP1-210ENST00000554976 KLHL12Q53G59 568 aa8□□□□□ -1.13
TDP1-210ENST00000554976 LCN1P1Q5VSP4 162 aa8□□□□□ -1.13
TDP1-210ENST00000554976 OPN5Q6U736 354 aa8□□□□□ -1.13
TDP1-210ENST00000554976 KLBQ86Z14 1044 aa8□□□□□ -1.13
TDP1-210ENST00000554976 SLC35F2Q8IXU6 374 aa8□□□□□ -1.13
TDP1-210ENST00000554976 SYS1Q8N2H4 156 aa8□□□□□ -1.13
TDP1-210ENST00000554976 ZNF417Q8TAU3 575 aa8□□□□□ -1.13
TDP1-210ENST00000554976 ASB10Q8WXI3 467 aa8□□□□□ -1.13
TDP1-210ENST00000554976 ZMYND19Q96E35 227 aaPredicted RBP8□□□□□ -1.13
TDP1-210ENST00000554976 UBL7Q96S82 380 aaPredicted RBP8□□□□□ -1.13
TDP1-210ENST00000554976 ZNF587Q96SQ5 575 aaPredicted RBP8□□□□□ -1.13
TDP1-210ENST00000554976 MMP27Q9H306 513 aa8□□□□□ -1.13
TDP1-210ENST00000554976 SDHAF3Q9NRP4 125 aa8□□□□□ -1.13
TDP1-210ENST00000554976 KLHDC2Q9Y2U9 406 aa8□□□□□ -1.13
TDP1-210ENST00000554976 A0A075B6Q4 140 aa8□□□□□ -1.13
TDP1-210ENST00000554976 LOC100506127A0A0U1RQW1 187 aa8□□□□□ -1.13
TDP1-210ENST00000554976 CDRT15L2A8MXV6 281 aa8□□□□□ -1.13
TDP1-210ENST00000554976 CDK2AP1O14519 115 aa8□□□□□ -1.13
TDP1-210ENST00000554976 AKAP8O43823 692 aaKnown RBP8□□□□□ -1.13
TDP1-210ENST00000554976 CRYZL1O95825 349 aa8□□□□□ -1.13
TDP1-210ENST00000554976 NUDT14O95848 222 aa8□□□□□ -1.13
TDP1-210ENST00000554976 SHC1P29353 583 aa8□□□□□ -1.13
TDP1-210ENST00000554976 NBL1P41271 181 aa8□□□□□ -1.13
TDP1-210ENST00000554976 RPL27P61353 136 aaKnown RBP8□□□□□ -1.13
TDP1-210ENST00000554976 DNASE1L3Q13609 305 aa8□□□□□ -1.13
TDP1-210ENST00000554976 RGS21Q2M5E4 152 aa8□□□□□ -1.13
TDP1-210ENST00000554976 PXKQ7Z7A4 578 aa8□□□□□ -1.13
TDP1-210ENST00000554976 ZFP41Q8N8Y5 198 aa8□□□□□ -1.13
TDP1-210ENST00000554976 NLGN4YQ8NFZ3 816 aaPredicted RBP8□□□□□ -1.13
TDP1-210ENST00000554976 SLC25A46Q96AG3 418 aa8□□□□□ -1.13
TDP1-210ENST00000554976 ZBTB8AQ96BR9 441 aa8□□□□□ -1.13
TDP1-210ENST00000554976 TSSK2Q96PF2 358 aa8□□□□□ -1.13
TDP1-210ENST00000554976 ASPNQ9BXN1 380 aa8□□□□□ -1.13
TDP1-210ENST00000554976 TSPAN10Q9H1Z9 355 aaPredicted RBP8□□□□□ -1.13
TDP1-210ENST00000554976 CCDC86Q9H6F5 360 aaKnown RBP8□□□□□ -1.13
TDP1-210ENST00000554976 METTL7AQ9H8H3 244 aa8□□□□□ -1.13
TDP1-210ENST00000554976 RPRD1BQ9NQG5 326 aaKnown RBP8□□□□□ -1.13
TDP1-210ENST00000554976 PLEKHB1Q9UF11 243 aaPredicted RBP8□□□□□ -1.13
TDP1-210ENST00000554976 VDAC3Q9Y277 283 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms