RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 HIKESHIQ53FT3 197 aa10.85□□□□□ -0.67
SYNE2-214ENST00000554928 PODNL1Q6PEZ8 512 aa10.85□□□□□ -0.67
SYNE2-214ENST00000554928 OR52N5Q8NH56 324 aa10.85□□□□□ -0.67
SYNE2-214ENST00000554928 SLC7A13Q8TCU3 470 aa10.85□□□□□ -0.67
SYNE2-214ENST00000554928 HS6ST2Q96MM7 605 aa10.85□□□□□ -0.67
SYNE2-214ENST00000554928 FUZQ9BT04 418 aa10.85□□□□□ -0.67
SYNE2-214ENST00000554928 THTPAQ9BU02 230 aa10.85□□□□□ -0.67
SYNE2-214ENST00000554928 HDHD5Q9BXW7 423 aa10.85□□□□□ -0.67
SYNE2-214ENST00000554928 OR10A4Q9H209 315 aa10.85□□□□□ -0.67
SYNE2-214ENST00000554928 NELFAQ9H3P2 528 aa10.85□□□□□ -0.67
SYNE2-214ENST00000554928 PLEKHF2Q9H8W4 249 aa10.85□□□□□ -0.67
SYNE2-214ENST00000554928 TAS2R16Q9NYV7 291 aa10.85□□□□□ -0.67
SYNE2-214ENST00000554928 ACTR3BQ9P1U1 418 aa10.85□□□□□ -0.67
SYNE2-214ENST00000554928 RCE1Q9Y256 329 aa10.85□□□□□ -0.67
SYNE2-214ENST00000554928 ALPK2Q86TB3 2170 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 TRAV27A0A087WT01 109 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 CIB4A0PJX0 185 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 OR5H1A6NKK0 313 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 BLOC1S5-TXNDC5H3BN57 136 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 CDC42EP2O14613 210 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 ACOT8O14734 319 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 RNF13O43567 381 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 GMNNO75496 209 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 SEC14L2O76054 403 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 H1F0P07305 194 aaKnown RBP10.84□□□□□ -0.67
SYNE2-214ENST00000554928 TSPAN19P0C672 248 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 PPP3CBP16298 524 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 MPGP29372 298 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 GPR4P46093 362 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 BIDP55957 195 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 PRKCDQ05655 676 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 BNIP1Q12981 228 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 CAMK2DQ13557 499 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 SPATS1Q496A3 300 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 LCN8Q6JVE9 175 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 SLC35D2Q76EJ3 337 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 NANOGNBQ7Z5D8 188 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 PXKQ7Z7A4 578 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 IGFN1Q86VF2 1251 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 C20orf196Q8IYI0 205 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 POMGNT2Q8NAT1 580 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 OR13C2Q8NGS9 318 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 OR52J3Q8NH60 311 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 LIPHQ8WWY8 451 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 ACOT11Q8WXI4 607 aaPredicted RBP10.84□□□□□ -0.67
SYNE2-214ENST00000554928 NEUROG1Q92886 237 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 BPIFA2Q96DR5 249 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 PLPPR2Q96GM1 343 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 DHRS1Q96LJ7 313 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 MUS81Q96NY9 551 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 SEPHS2Q99611 448 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 PIP5K1AQ99755 562 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 GPA33Q99795 319 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 C1QTNF6Q9BXI9 259 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 C1orf21Q9H246 121 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 FANCFQ9NPI8 374 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 ZNF226Q9NYT6 803 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 PRPF19Q9UMS4 504 aaKnown RBP10.84□□□□□ -0.67
SYNE2-214ENST00000554928 NOX1Q9Y5S8 564 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 SLC25A15Q9Y619 301 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 SPG11Q96JI7 2443 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 AKAP6Q13023 2319 aa10.84□□□□□ -0.67
SYNE2-214ENST00000554928 A0A096LPE4 126 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 A0A1W2PPZ6 126 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 ZNF503-AS2A6NEH8 195 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 DPRXA6NFQ7 191 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 M0R3G1 203 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 SLC43A1O75387 559 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 OR6A2O95222 327 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 RHCEP18577 417 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 ERFP50548 548 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 TUBA1BP68363 451 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 TUBA4AP68366 448 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 ROR2Q01974 943 aaKnown RBP10.83□□□□□ -0.68
SYNE2-214ENST00000554928 TRIM25Q14258 630 aaKnown RBP10.83□□□□□ -0.68
SYNE2-214ENST00000554928 PPA1Q15181 289 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 FGD3Q5JSP0 725 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 TIMM23BQ5SRD1 257 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 FBXW10Q5XX13 1052 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 PGM2L1Q6PCE3 622 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 ZNF730Q6ZMV8 503 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 MBOAT2Q6ZWT7 520 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 TUBA1AQ71U36 451 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 CDH24Q86UP0 819 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 CYP4Z1Q86W10 505 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 DHFR2Q86XF0 187 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 LRRC75AQ8NAA5 344 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 OR1K1Q8NGR3 316 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 OR51A7Q8NH64 312 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 HSD17B8Q92506 261 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 HTRA1Q92743 480 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 FAM46AQ96IP4 442 aaKnown RBP10.83□□□□□ -0.68
SYNE2-214ENST00000554928 TNFRSF13CQ96RJ3 184 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 CADM1Q9BY67 442 aaKnown RBP10.83□□□□□ -0.68
SYNE2-214ENST00000554928 LINC00470Q9BZP3 86 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 GPR35Q9HC97 309 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 VNN3Q9NY84 501 aa10.83□□□□□ -0.68
SYNE2-214ENST00000554928 A0A1W2PRQ8 180 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 EFCAB9A8MZ26 197 aa10.82□□□□□ -0.68
SYNE2-214ENST00000554928 ZNF587BE7ETH6 402 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms