RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 CXXC5Q7LFL8 322 aaKnown RBP9.32□□□□□ -0.92
SHMT2-215ENST00000554656 DTX2Q86UW9 622 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 CBR4Q8N4T8 237 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 TOR1AIP2Q8NFQ8 470 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 SLC35B4Q969S0 331 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 DNAJA3Q96EY1 480 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 NR1H4Q96RI1 486 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-215ENST00000554656 SLC29A1Q99808 456 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 REG4Q9BYZ8 158 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 POLR2J2Q9GZM3 115 aaKnown RBP9.32□□□□□ -0.92
SHMT2-215ENST00000554656 POLR2J3Q9H1A7 115 aaKnown RBP9.32□□□□□ -0.92
SHMT2-215ENST00000554656 ESRP2Q9H6T0 727 aaKnown RBP9.32□□□□□ -0.92
SHMT2-215ENST00000554656 ACER3Q9NUN7 267 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 MKLN1Q9UL63 735 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 ZNF232Q9UNY5 417 aa9.32□□□□□ -0.92
SHMT2-215ENST00000554656 ARFGEF3Q5TH69 2177 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 IGKV3D-15A0A087WSY6 115 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 A0A096LNT2 108 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 ARRDC5A6NEK1 342 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 AGAP5A6NIR3 686 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 ZNF716A6NP11 495 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 ZNF724A8MTY0 619 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 hCG_2039718K7EN88 272 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 SOCS2O14508 198 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 EI24O14681 340 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 CYP7B1O75881 506 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 CSTAP01040 98 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 ALPLP05186 524 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 RAD23AP54725 363 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 FOXG1P55316 489 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-215ENST00000554656 SPOCK1Q08629 439 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 MERTKQ12866 999 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 MED21Q13503 144 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 PPA1Q15181 289 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 LIN52Q52LA3 116 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 SYT14P1Q58G82 188 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 ZNF311Q5JNZ3 666 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 RNF220Q5VTB9 566 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 TSEN54Q7Z6J9 526 aaKnown RBP9.31□□□□□ -0.92
SHMT2-215ENST00000554656 HMGN2P46Q86SG4 172 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 CARM1Q86X55 608 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 GALNT4Q8N4A0 578 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 LINC00471Q8N535 108 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 ZNF433Q8N7K0 673 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-215ENST00000554656 SMYD1Q8NB12 490 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 OR52P1PQ8NH57 321 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 ST8SIA1Q92185 356 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 ARL5BQ96KC2 179 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 DHRS1Q96LJ7 313 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 ARHGDIGQ99819 225 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 ARMC7Q9H6L4 198 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 NGBQ9NPG2 151 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 SMPD3Q9NY59 655 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-215ENST00000554656 SLC13A4Q9UKG4 626 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 SAMHD1Q9Y3Z3 626 aaKnown RBP9.31□□□□□ -0.92
SHMT2-215ENST00000554656 LYVE1Q9Y5Y7 322 aa9.31□□□□□ -0.92
SHMT2-215ENST00000554656 OR5H1A6NKK0 313 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 CLDN24A6NM45 220 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 H0YAE9 185 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 PDLIM1O00151 329 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 IGHV3-9P01782 118 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 ANXA8P13928 327 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 CDH2P19022 906 aaPredicted RBP9.3□□□□□ -0.92
SHMT2-215ENST00000554656 IFNA8P32881 189 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 LIMS1P48059 325 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 RPS6KA3P51812 740 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 CDH11P55287 796 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 ETFDHQ16134 617 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 TIMM23BQ5SRD1 257 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 C11orf71Q6IPW1 123 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 B3GLCTQ6Y288 498 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 TMPPEQ6ZT21 453 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 CMIPQ8IY22 773 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 PIK3C3Q8NEB9 887 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 GTPBP3Q969Y2 492 aaKnown RBP9.3□□□□□ -0.92
SHMT2-215ENST00000554656 ZG16BQ96DA0 208 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 TRMT61AQ96FX7 289 aaKnown RBP9.3□□□□□ -0.92
SHMT2-215ENST00000554656 AMBRA1Q9C0C7 1298 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 OR11A1Q9GZK7 315 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 ANKRD19PQ9H560 264 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 CTPS2Q9NRF8 586 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 CISD1Q9NZ45 108 aaKnown RBP9.3□□□□□ -0.92
SHMT2-215ENST00000554656 ZNF443Q9Y2A4 671 aaPredicted RBP9.3□□□□□ -0.92
SHMT2-215ENST00000554656 SH3GLB1Q9Y371 365 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 ORC6Q9Y5N6 252 aa9.3□□□□□ -0.92
SHMT2-215ENST00000554656 IGHV4-30-2A0A087WSY4 118 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 A0A1W2PR80 420 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 E7EQL1 145 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 SULT2B1O00204 365 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 TNFRSF11BO00300 401 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 DLGAP1O14490 977 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 AP3D1O14617 1153 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 ABCD4O14678 606 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 FMO6PO60774 539 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 RAD51DO75771 328 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 ITGA5P08648 1049 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 THRBP10828 461 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 IL7RP16871 459 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 PGCP20142 388 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 RRM2P31350 389 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms