RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 hCG_1818297A0A087WSY0 165 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 LPLP06858 475 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 SLC6A6P31641 620 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 UGT2B10P36537 528 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 MRPL19P49406 292 aaKnown RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 NSUN5P1Q3KNT7 163 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 RABL3Q5HYI8 236 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 C22orf42Q6IC83 251 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 FAM71AQ8IYT1 594 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 PEBP4Q96S96 227 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 STACQ99469 402 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 LPAR4Q99677 370 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 PKP2Q99959 881 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 ACBD6Q9BR61 282 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 AP5S1Q9NUS5 200 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 PAQR5Q9NXK6 330 aaPredicted RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 PREX1Q8TCU6 1659 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 LILRA4P59901 499 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 IL11RAQ14626 422 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 TERB2Q8NHR7 220 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 OSTF1Q92882 214 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 POP5Q969H6 163 aaKnown RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 IGSF21Q96ID5 467 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 EBF2Q9HAK2 575 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 OAZ3Q9UMX2 235 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 ADAMTSL1Q8N6G6 1762 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 F2RL2O00254 374 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 TNFAIP6P98066 277 aaPredicted RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 OR7E24Q6IFN5 339 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 AGTRAPQ6RW13 159 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 TCTE3Q8IZS6 198 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 GPR32P1Q8NGA4 272 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 AKTIPQ9H8T0 292 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 CSNK1G1Q9HCP0 422 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 NDRG3Q9UGV2 375 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 EMC9Q9Y3B6 208 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 PCDHA9Q9Y5H5 950 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 FAM234BA2RU67 622 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 CCSO14618 274 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 H2AFB2P0C5Z0 115 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 SRSF4Q08170 494 aaKnown RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 UGT3A2Q3SY77 523 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 RFESDQ8TAC1 157 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 ZNF596Q8TC21 504 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 TMBIM1Q969X1 311 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 SLC29A3Q9BZD2 475 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 CD93Q9NPY3 652 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 IGHV3-35A0A0C4DH35 117 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 TBX10O75333 385 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 OR13C7P0DN81 318 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 ELK1P19419 428 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 PPIBP23284 216 aaKnown RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 PKLRP30613 574 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 UQCRFS1P47985 274 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 WNT7BP56706 349 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 HOXA4Q00056 320 aaPredicted RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 CIRBPQ14011 172 aaKnown RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 DMRTA1Q5VZB9 504 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 BCDIN3DQ7Z5W3 292 aaKnown RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 ZNF683Q8IZ20 524 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 FAM58AQ8N1B3 248 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 PLD6Q8N2A8 252 aaKnown RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 MUC20Q8N307 709 aaPredicted RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 SMG8Q8ND04 991 aaKnown RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 OR13C6PQ8NH95 151 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 RIT1Q92963 219 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 TMEM80Q96HE8 168 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 INPP5KQ9BT40 448 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 SMIM35A0A1B0GVV1 85 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 LRIT2A6NDA9 550 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 PRAMEF25A6NGN4 478 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 COX6B1P14854 86 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 SLC6A4P31645 630 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 CRISP3P54108 245 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 TGIF1Q15583 401 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 PARP15Q460N3 678 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 PDLIM3Q53GG5 364 aaPredicted RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 PRAMEF5Q5TYX0 476 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 PRAMEF6Q5VXH4 476 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 KCTD20Q7Z5Y7 419 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 MMP21Q8N119 569 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 OR10X1Q8NGY0 326 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 EMG1Q92979 244 aaKnown RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 NECTIN4Q96NY8 510 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 EDF1O60869 148 aaKnown RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 FBXO43Q4G163 708 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 TEX261Q6UWH6 196 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 OR5D16Q8NGK9 328 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 FAIMQ9NVQ4 179 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 NUDT4Q9NZJ9 180 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 KIF13BQ9NQT8 1826 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 IRF4Q15306 451 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 SLC36A2Q495M3 483 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 LILRB1Q8NHL6 650 aaPredicted RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 SMPDL3AQ92484 453 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 FCGR1BQ92637 280 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 TIMD4Q96H15 378 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 PLK3Q9H4B4 646 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 PIGLQ9Y2B2 252 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 ARPC3O15145 178 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms