RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 RPS6P62753 249 aaKnown RBP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 RPL19P84098 196 aaKnown RBP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 SCN1BQ07699 218 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 SNTB2Q13425 540 aaKnown RBP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 MAMLD1Q13495 774 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 HTR4Q13639 388 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 SF3A2Q15428 464 aaKnown RBP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 MLF2Q15773 248 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 NRF1Q16656 503 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 IMPG1Q17R60 797 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 SOWAHAQ2M3V2 549 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 NHLRC3Q5JS37 347 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 SIRPB2Q5JXA9 342 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 GPR157Q5UAW9 335 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 MARC1Q5VT66 337 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 NXNL2Q5VZ03 156 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 TTC23Q5W5X9 447 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 TRIQKQ629K1 86 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 PLCXD3Q63HM9 321 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 ZNF836Q6ZNA1 936 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 RNF165Q6ZSG1 346 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 H2AFVQ71UI9 128 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 ABHD13Q7L211 337 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 FAM220AQ7Z4H9 259 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 IRF2BP2Q7Z5L9 587 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 YRDCQ86U90 279 aaKnown RBP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 CUZD1Q86UP6 607 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 COMMD2Q86X83 199 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 ZNF573Q86YE8 665 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 RBM45Q8IUH3 476 aaKnown RBP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 SNX29P2Q8IUI4 249 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 WDFY1Q8IWB7 410 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 DCUN1D3Q8IWE4 304 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 ARHGAP12Q8IWW6 846 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 ZFP82Q8N141 532 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 LRRC57Q8N9N7 239 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 CCDC71LQ8N9Z2 235 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 L3MBTL4Q8NA19 623 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 FAM47BQ8NA70 645 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 OR10H4Q8NGA5 316 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 OR4K14Q8NGD5 310 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 OR51D1Q8NGF3 324 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 OR10W1Q8NGF6 305 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 OR8D4Q8NGM9 314 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 OR13J1Q8NGT2 312 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 OR5R1Q8NH85 324 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 SPPL2AQ8TCT8 520 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 CD200R1Q8TD46 325 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 ZNF431Q8TF32 576 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 LRRC15Q8TF66 581 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 XAGE5Q8WWM1 108 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 ASB5Q8WWX0 329 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 CRYGNQ8WXF5 182 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 ACOT12Q8WYK0 555 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 HGDQ93099 445 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 ERGIC1Q969X5 290 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 ARRDC3Q96B67 414 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 HAVCR1Q96D42 359 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 KTI12Q96EK9 354 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 C1GALT1C1Q96EU7 318 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 RNFT2Q96EX2 444 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 ALKBH3Q96Q83 286 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 OR5B2Q96R09 309 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 EGFL8Q99944 293 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 PIGQQ9BRB3 760 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 SLC30A2Q9BRI3 323 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 C16orf70Q9BSU1 422 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 FUZQ9BT04 418 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 THAP7Q9BT49 309 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 FTHL17Q9BXU8 183 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 B3GNT5Q9BYG0 378 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 MS4A7Q9GZW8 240 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 DPEP2Q9H4A9 486 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 MLXIPQ9HAP2 919 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 SMURF2Q9HAU4 748 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 IL21RQ9HBE5 538 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 MMP25Q9NPA2 562 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 LTB4R2Q9NPC1 389 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 GPR173Q9NS66 373 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 NLE1Q9NVX2 485 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 CALML5Q9NZT1 146 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 LRFN1Q9P244 771 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 SEC14L3Q9UDX4 400 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 ZDHHC2Q9UIJ5 367 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 PHF11Q9UIL8 331 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 TBC1D24Q9ULP9 559 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 PPIEQ9UNP9 301 aaKnown RBP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 ICKQ9UPZ9 632 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 SH2B3Q9UQQ2 575 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 SPTAN1Q13813 2472 aaKnown RBP4.01□□□□□ -1.77
ATXN3-227ENST00000554491 CFAP46Q8IYW2 2715 aa4.01□□□□□ -1.77
ATXN3-227ENST00000554491 COL6A6A6NMZ7 2263 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 A0A087X0T9 212 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 A0A1B0GUH1 482 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 ATP6AP2A0A1C7CYW4 349 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 A0A1W2PNV4 684 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 TMEM72A0PK05 275 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 A1L4Q6 167 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 HELTA6NFD8 242 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms