RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 CNPY3Q9BT09 278 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 RAB1BQ9H0U4 201 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 GOLPH3Q9H4A6 298 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 MEPEQ9NQ76 525 aaPredicted RBP1.82□□□□□ -2.12
SRP54-204ENST00000553923 AGPAT4Q9NRZ5 378 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 NUDT15Q9NV35 164 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 LSM7Q9UK45 103 aaKnown RBP1.82□□□□□ -2.12
SRP54-204ENST00000553923 ATP6V1DQ9Y5K8 247 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 USP16Q9Y5T5 823 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 AUP1Q9Y679 476 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 MROH7-TTC4A0A0A0MT08 1334 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 UBN2Q6ZU65 1347 aa1.82□□□□□ -2.12
SRP54-204ENST00000553923 NEURL4Q96JN8 1562 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 TRAV6A0A075B6T7 132 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 IGHV3OR16-10A0A075B7F0 116 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 NSG1A0A0A6YYJ2 146 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 TRGV8A0A0C4DH27 118 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 A0A1W2PRD5 423 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 OR5B21A6NL26 309 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 C15orf61A6NNL5 157 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 IQCF5A8MTL0 148 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 SRRM5B3KS81 715 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 E7ENQ6 273 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 PDHXO00330 501 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 PLPP1O14494 284 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 RFXANKO14593 260 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 TFECO14948 347 aaPredicted RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 MBTPS2O43462 519 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 ENSAO43768 121 aaKnown RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 IDH3BO43837 385 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 CALUO43852 315 aaPredicted RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 TYROBPO43914 113 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 SOX15O60248 233 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 UGT1A9O60656 530 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 NIPSNAP2O75323 286 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 NDUFS6O75380 124 aaKnown RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 KLHL2O95198 593 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 LCA5LO95447 670 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 C1orf105O95561 183 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 ETHE1O95571 254 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 TSPAN13O95857 204 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 PIGRP01833 764 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 LGALS2P05162 132 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 ACSM4P0C7M7 580 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 RBMY1CP0DJD4 496 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 SELEP16581 610 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 PSMC3P17980 439 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 ATP6V1B2P21281 511 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 PRKACGP22612 351 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 IL12AP29459 219 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 CD40LGP29965 261 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 RORAP35398 523 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 CFHR2P36980 270 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 OPRD1P41143 372 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 ETV5P41161 510 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 NSG1P42857 185 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 GPR1P46091 355 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 CRISP1P54107 249 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 HMGCS2P54868 508 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 PLTPP55058 493 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 TMEM50BP56557 158 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 GSCP56915 257 aaPredicted RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 ERVK-16P61578 105 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 VLDLRP98155 873 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 ZNF154Q13106 437 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 ORC2Q13416 577 aaPredicted RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 AANATQ16613 207 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 CYP51A1Q16850 503 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 TIGITQ495A1 244 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 EIPR1Q53HC9 387 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 CARD16Q5EG05 197 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 MS4A13Q5J8X5 152 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 C1orf220Q5T0J3 134 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 DCST2Q5T1A1 773 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 ZNF57Q68EA5 555 aaPredicted RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 H3F3CQ6NXT2 135 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 C6orf89Q6UWU4 347 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 Q6ZN92 141 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 MBOAT1Q6ZNC8 495 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 Q6ZRP5 223 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 FRA10AC1Q70Z53 315 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 PID1Q7Z2X4 250 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 CYP4Z1Q86W10 505 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 ERO1BQ86YB8 467 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 PLCZ1Q86YW0 608 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 NRMQ8IXM6 262 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 PRR22Q8IZ63 422 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 LIX1Q8N485 282 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 MS4A15Q8N5U1 240 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 Q8N7P7 452 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 C15orf54Q8N8G6 183 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 ZNRF1Q8ND25 227 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 OR2G2Q8NGZ5 317 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 ZNF564Q8TBZ8 553 aaPredicted RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 SPPL2AQ8TCT8 520 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 HTR3CQ8WXA8 447 aa1.81□□□□□ -2.12
SRP54-204ENST00000553923 ACOT11Q8WXI4 607 aaPredicted RBP1.81□□□□□ -2.12
SRP54-204ENST00000553923 MRPS31Q92665 395 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms