RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 STARD5Q9NSY2 213 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 ETNK2Q9NVF9 386 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 UTP6Q9NYH9 597 aaKnown RBP2.4□□□□□ -2.03
SCFD1-210ENST00000553693 PTBP2Q9UKA9 531 aaKnown RBP2.4□□□□□ -2.03
SCFD1-210ENST00000553693 NPIPA1Q9UND3 350 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 ASB3Q9Y575 518 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 DOCK2Q92608 1830 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 HELTA6NFD8 242 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 E9PBE3 544 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 MED7O43513 233 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 SNNO75324 88 aaPredicted RBP2.39□□□□□ -2.03
SCFD1-210ENST00000553693 H2BFMP0C1H6 154 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 HNF1AP20823 631 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 ADORA1P30542 326 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 YWHABP31946 246 aaKnown RBP2.39□□□□□ -2.03
SCFD1-210ENST00000553693 HPCAL1P37235 193 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 RPL13AP40429 203 aaKnown RBP2.39□□□□□ -2.03
SCFD1-210ENST00000553693 DHPSP49366 369 aaPredicted RBP2.39□□□□□ -2.03
SCFD1-210ENST00000553693 NOVA1P51513 510 aaKnown RBP2.39□□□□□ -2.03
SCFD1-210ENST00000553693 CCL23P55773 120 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 LINC00315P59091 139 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 OC90Q02509 493 aaPredicted RBP2.39□□□□□ -2.03
SCFD1-210ENST00000553693 SYPL1Q16563 259 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 KCTD19Q17RG1 926 aaPredicted RBP2.39□□□□□ -2.03
SCFD1-210ENST00000553693 LINC01620Q4KN68 170 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 TEX44Q53QW1 395 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 ACSM5Q6NUN0 579 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 UFSP1Q6NVU6 142 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 HACD2Q6Y1H2 254 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 NLRP9Q7RTR0 991 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 TRPM8Q7Z2W7 1104 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 HSD11B1LQ7Z5J1 315 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 SLC35F2Q8IXU6 374 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 LRRC43Q8N309 656 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 BBS5Q8N3I7 341 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 ZNF433Q8N7K0 673 aaPredicted RBP2.39□□□□□ -2.03
SCFD1-210ENST00000553693 OR10A7Q8NGE5 316 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 ACER1Q8TDN7 264 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 AENQ8WTP8 325 aaKnown RBP2.39□□□□□ -2.03
SCFD1-210ENST00000553693 RNF139Q8WU17 664 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 OSTF1Q92882 214 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 EMG1Q92979 244 aaKnown RBP2.39□□□□□ -2.03
SCFD1-210ENST00000553693 DNAJA3Q96EY1 480 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 SLC35E1Q96K37 410 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 IFT74Q96LB3 600 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 TSNARE1Q96NA8 513 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 IL4I1Q96RQ9 567 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 TBX15Q96SF7 602 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 COPS8Q99627 209 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 UBE2ZQ9H832 354 aaPredicted RBP2.39□□□□□ -2.03
SCFD1-210ENST00000553693 CALHM2Q9HA72 323 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 PATZ1Q9HBE1 687 aaKnown RBP2.39□□□□□ -2.03
SCFD1-210ENST00000553693 UFSP2Q9NUQ7 469 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 ELOVL2Q9NXB9 296 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 PIPOXQ9P0Z9 390 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 SUN2Q9UH99 717 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 PCSK1NQ9UHG2 260 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 COPS3Q9UNS2 423 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 PIGLQ9Y2B2 252 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 CAB39Q9Y376 341 aaPredicted RBP2.39□□□□□ -2.03
SCFD1-210ENST00000553693 OARD1Q9Y530 152 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 GMPPBQ9Y5P6 360 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 GBF1Q92538 1859 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 ZFHX2Q9C0A1 2572 aaPredicted RBP2.39□□□□□ -2.03
SCFD1-210ENST00000553693 MROH7-TTC4A0A0A0MT08 1334 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 SYNRGQ9UMZ2 1314 aa2.39□□□□□ -2.03
SCFD1-210ENST00000553693 PRRC2BQ5JSZ5 2229 aaKnown RBP2.38□□□□□ -2.03
SCFD1-210ENST00000553693 A0A0G2JMZ2 1700 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 XKRY2A2RUG3 117 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 H0YC42 278 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 HIP1O00291 1037 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 ERLIN1O75477 346 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 LYPLA1O75608 230 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-210ENST00000553693 UGT2B17O75795 530 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 SNAI1O95863 264 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-210ENST00000553693 ASGR1P07306 291 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 SLC2A3P11169 496 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 TNNI1P19237 187 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 MX1P20591 662 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 TBXA2RP21731 343 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 PTBP1P26599 531 aaKnown RBP eCLIP2.38□□□□□ -2.03
SCFD1-210ENST00000553693 GRIA1P42261 906 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 CDH4P55283 916 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 TIMM10P62072 90 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 UBE2HP62256 183 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 RPS6P62753 249 aaKnown RBP2.38□□□□□ -2.03
SCFD1-210ENST00000553693 PLD1Q13393 1074 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 ELAVL3Q14576 367 aaKnown RBP2.38□□□□□ -2.03
SCFD1-210ENST00000553693 DPYSL2Q16555 572 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 OR2B11Q5JQS5 317 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 FRA10AC1Q70Z53 315 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 ASCL5Q7RTU5 278 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 TMCO2Q7Z6W1 182 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-210ENST00000553693 SLC22A9Q8IVM8 553 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 VSTM4Q8IW00 320 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 SLC38A6Q8IZM9 456 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 TMEM123Q8N131 208 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 BPIFB2Q8N4F0 458 aa2.38□□□□□ -2.03
SCFD1-210ENST00000553693 TRUB1Q8WWH5 349 aaKnown RBP2.38□□□□□ -2.03
SCFD1-210ENST00000553693 C18orf25Q96B23 403 aaPredicted RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms