RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 NPIPB13A6NJU9 1138 aa16.21■□□□□ 0.19
CPSF2-202ENST00000553427 NPIPB4C9JG80 1138 aa16.21■□□□□ 0.19
CPSF2-202ENST00000553427 UPK3AO75631 287 aa16.21■□□□□ 0.19
CPSF2-202ENST00000553427 KRT33AO76009 404 aa16.21■□□□□ 0.19
CPSF2-202ENST00000553427 UMPSP11172 480 aa16.21■□□□□ 0.19
CPSF2-202ENST00000553427 FUT1P19526 365 aa16.21■□□□□ 0.19
CPSF2-202ENST00000553427 FUT4P22083 530 aa16.21■□□□□ 0.19
CPSF2-202ENST00000553427 AHCYP23526 432 aa16.21■□□□□ 0.19
CPSF2-202ENST00000553427 MSX2P35548 267 aaPredicted RBP16.21■□□□□ 0.19
CPSF2-202ENST00000553427 STK11Q15831 433 aa16.21■□□□□ 0.19
CPSF2-202ENST00000553427 PAMR1Q6UXH9 720 aa16.21■□□□□ 0.19
CPSF2-202ENST00000553427 MBOAT2Q6ZWT7 520 aa16.21■□□□□ 0.19
CPSF2-202ENST00000553427 LINGO2Q7L985 606 aa16.21■□□□□ 0.19
CPSF2-202ENST00000553427 C20orf196Q8IYI0 205 aa16.21■□□□□ 0.19
CPSF2-202ENST00000553427 POP5Q969H6 163 aaKnown RBP16.21■□□□□ 0.19
CPSF2-202ENST00000553427 BPIFA2Q96DR5 249 aa16.21■□□□□ 0.19
CPSF2-202ENST00000553427 ADAD1Q96M93 576 aaKnown RBP16.21■□□□□ 0.19
CPSF2-202ENST00000553427 HS3ST6Q96QI5 342 aa16.21■□□□□ 0.19
CPSF2-202ENST00000553427 OBP2BQ9NPH6 170 aa16.21■□□□□ 0.19
CPSF2-202ENST00000553427 RHCGQ9UBD6 479 aa16.21■□□□□ 0.19
CPSF2-202ENST00000553427 SLC25A15Q9Y619 301 aa16.21■□□□□ 0.19
CPSF2-202ENST00000553427 PRR14LQ5THK1 2151 aa16.2■□□□□ 0.18
CPSF2-202ENST00000553427 A0A087WUU8 490 aa16.2■□□□□ 0.18
CPSF2-202ENST00000553427 SLC35F4A4IF30 521 aa16.2■□□□□ 0.18
CPSF2-202ENST00000553427 PIP5K1CO60331 668 aa16.2■□□□□ 0.18
CPSF2-202ENST00000553427 UBOX5O94941 541 aa16.2■□□□□ 0.18
CPSF2-202ENST00000553427 H1F0P07305 194 aaKnown RBP16.2■□□□□ 0.18
CPSF2-202ENST00000553427 PAX7P23759 505 aa16.2■□□□□ 0.18
CPSF2-202ENST00000553427 RPS4XP62701 263 aaKnown RBP16.2■□□□□ 0.18
CPSF2-202ENST00000553427 PRKCDQ05655 676 aa16.2■□□□□ 0.18
CPSF2-202ENST00000553427 LGALS3BPQ08380 585 aa16.2■□□□□ 0.18
CPSF2-202ENST00000553427 TRIM25Q14258 630 aaKnown RBP16.2■□□□□ 0.18
CPSF2-202ENST00000553427 ANKDD1AQ495B1 522 aa16.2■□□□□ 0.18
CPSF2-202ENST00000553427 LCN8Q6JVE9 175 aa16.2■□□□□ 0.18
CPSF2-202ENST00000553427 NRMQ8IXM6 262 aa16.2■□□□□ 0.18
CPSF2-202ENST00000553427 GPR137CQ8N3F9 429 aa16.2■□□□□ 0.18
CPSF2-202ENST00000553427 OR6X1Q8NH79 312 aa16.2■□□□□ 0.18
CPSF2-202ENST00000553427 SLC7A13Q8TCU3 470 aa16.2■□□□□ 0.18
CPSF2-202ENST00000553427 MAGEE2Q8TD90 523 aaPredicted RBP16.2■□□□□ 0.18
CPSF2-202ENST00000553427 PLPPR2Q96GM1 343 aa16.2■□□□□ 0.18
CPSF2-202ENST00000553427 PIP5K1AQ99755 562 aa16.2■□□□□ 0.18
CPSF2-202ENST00000553427 ESRP2Q9H6T0 727 aaKnown RBP16.2■□□□□ 0.18
CPSF2-202ENST00000553427 SLC17A5Q9NRA2 495 aa16.2■□□□□ 0.18
CPSF2-202ENST00000553427 MED29Q9NX70 200 aa16.2■□□□□ 0.18
CPSF2-202ENST00000553427 ST6GALNAC2Q9UJ37 374 aa16.2■□□□□ 0.18
CPSF2-202ENST00000553427 HIF3AQ9Y2N7 669 aa16.2■□□□□ 0.18
CPSF2-202ENST00000553427 AMDHD2Q9Y303 409 aa16.2■□□□□ 0.18
CPSF2-202ENST00000553427 MAGED1Q9Y5V3 778 aaPredicted RBP16.2■□□□□ 0.18
CPSF2-202ENST00000553427 ZNF726A6NNF4 738 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 C11orf98E9PRG8 122 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 RNF13O43567 381 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 IFI30P13284 250 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 HOXB1P14653 301 aaPredicted RBP16.19■□□□□ 0.18
CPSF2-202ENST00000553427 IFNGR1P15260 489 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 ATP6V1B2P21281 511 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 SLC9A3P48764 834 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 LSM11P83369 360 aaKnown RBP eCLIP16.19■□□□□ 0.18
CPSF2-202ENST00000553427 ROR2Q01974 943 aaKnown RBP16.19■□□□□ 0.18
CPSF2-202ENST00000553427 RPL18Q07020 188 aaKnown RBP16.19■□□□□ 0.18
CPSF2-202ENST00000553427 DNAL1Q4LDG9 190 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 NCMAPQ5T1S8 102 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 HMBOX1Q6NT76 420 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 ZNF730Q6ZMV8 503 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 SLC35D2Q76EJ3 337 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 HDDC2Q7Z4H3 204 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 WDR31Q8NA23 367 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 OR1K1Q8NGR3 316 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 NRGNQ92686 78 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 MCUR1Q96AQ8 359 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 ASB9Q96DX5 294 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 TXNDC15Q96J42 360 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 GPR35Q9HC97 309 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 IL1RAPQ9NPH3 570 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 TMEM5Q9Y2B1 443 aa16.19■□□□□ 0.18
CPSF2-202ENST00000553427 CENPBD1B2RD01 187 aa16.18■□□□□ 0.18
CPSF2-202ENST00000553427 BLOC1S5-TXNDC5H3BN57 136 aa16.18■□□□□ 0.18
CPSF2-202ENST00000553427 hCG_2039718K7EN88 272 aa16.18■□□□□ 0.18
CPSF2-202ENST00000553427 HOXC12P31275 282 aa16.18■□□□□ 0.18
CPSF2-202ENST00000553427 SMIM11AP58511 58 aa16.18■□□□□ 0.18
CPSF2-202ENST00000553427 C9orf135Q5VTT2 229 aa16.18■□□□□ 0.18
CPSF2-202ENST00000553427 ADAM5Q6NVV9 412 aa16.18■□□□□ 0.18
CPSF2-202ENST00000553427 ANKRD16Q6P6B7 361 aa16.18■□□□□ 0.18
CPSF2-202ENST00000553427 ZNF704Q6ZNC4 412 aaPredicted RBP16.18■□□□□ 0.18
CPSF2-202ENST00000553427 TMPRSS11FQ6ZWK6 438 aa16.18■□□□□ 0.18
CPSF2-202ENST00000553427 PIWIL3Q7Z3Z3 882 aaKnown RBP16.18■□□□□ 0.18
CPSF2-202ENST00000553427 BCL2L2Q92843 193 aaPredicted RBP16.18■□□□□ 0.18
CPSF2-202ENST00000553427 MBD6Q96DN6 1003 aa16.18■□□□□ 0.18
CPSF2-202ENST00000553427 SLC25A44Q96H78 314 aaPredicted RBP16.18■□□□□ 0.18
CPSF2-202ENST00000553427 SEPHS2Q99611 448 aa16.18■□□□□ 0.18
CPSF2-202ENST00000553427 FUZQ9BT04 418 aa16.18■□□□□ 0.18
CPSF2-202ENST00000553427 EMC6Q9BV81 110 aa16.18■□□□□ 0.18
CPSF2-202ENST00000553427 CRLF2Q9HC73 371 aa16.18■□□□□ 0.18
CPSF2-202ENST00000553427 MOV10Q9HCE1 1003 aaKnown RBP16.18■□□□□ 0.18
CPSF2-202ENST00000553427 B3GAT2Q9NPZ5 323 aa16.18■□□□□ 0.18
CPSF2-202ENST00000553427 NPAP1Q9NZP6 1156 aa16.18■□□□□ 0.18
CPSF2-202ENST00000553427 STX18Q9P2W9 335 aaKnown RBP16.18■□□□□ 0.18
CPSF2-202ENST00000553427 RNF115Q9Y4L5 304 aa16.18■□□□□ 0.18
CPSF2-202ENST00000553427 V9GYQ6 96 aa16.18■□□□□ 0.18
CPSF2-202ENST00000553427 ARPC4-TTLL3A0A0A6YYG9 625 aa16.17■□□□□ 0.18
CPSF2-202ENST00000553427 A0A1W2PRG6 482 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms