RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 GOSR2O14653 212 aa16.01■□□□□ 0.15
SYNE3-202ENST00000553340 GJA4P35212 333 aa16.01■□□□□ 0.15
SYNE3-202ENST00000553340 SCAND1P57086 179 aa16.01■□□□□ 0.15
SYNE3-202ENST00000553340 PRPS1P60891 318 aa16.01■□□□□ 0.15
SYNE3-202ENST00000553340 MAT1AQ00266 395 aaKnown RBP16.01■□□□□ 0.15
SYNE3-202ENST00000553340 C2orf68Q2NKX9 166 aa16.01■□□□□ 0.15
SYNE3-202ENST00000553340 PRRT3Q5FWE3 981 aa16.01■□□□□ 0.15
SYNE3-202ENST00000553340 LIPNQ5VXI9 398 aa16.01■□□□□ 0.15
SYNE3-202ENST00000553340 CFAP77Q6ZQR2 320 aa16.01■□□□□ 0.15
SYNE3-202ENST00000553340 SLC16A9Q7RTY1 509 aa16.01■□□□□ 0.15
SYNE3-202ENST00000553340 ZNF227Q86WZ6 799 aa16.01■□□□□ 0.15
SYNE3-202ENST00000553340 OR10G6Q8NH81 332 aa16.01■□□□□ 0.15
SYNE3-202ENST00000553340 TRIM43Q96BQ3 446 aaPredicted RBP16.01■□□□□ 0.15
SYNE3-202ENST00000553340 RBM18Q96H35 190 aaKnown RBP16.01■□□□□ 0.15
SYNE3-202ENST00000553340 Q96M85 177 aa16.01■□□□□ 0.15
SYNE3-202ENST00000553340 ADAD1Q96M93 576 aaKnown RBP16.01■□□□□ 0.15
SYNE3-202ENST00000553340 FRRS1LQ9P0K9 344 aa16.01■□□□□ 0.15
SYNE3-202ENST00000553340 TICRRQ7Z2Z1 1910 aa16.01■□□□□ 0.15
SYNE3-202ENST00000553340 TBC1D3IA0A087WXS9 549 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 TCRBV16S1A1N1A0A5B0 115 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 UPK3AO75631 287 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 IGKV1D-16P01601 117 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 FAM53BQ14153 422 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 CDH26Q8IXH8 852 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 C12orf76Q8N812 135 aaPredicted RBP16■□□□□ 0.15
SYNE3-202ENST00000553340 ZNF454Q8N9F8 522 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 OR5M9Q8NGP3 310 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 OR6N1Q8NGY5 312 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 TNFAIP8L1Q8WVP5 186 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 SIPA1Q96FS4 1042 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 PAWRQ96IZ0 340 aaKnown RBP16■□□□□ 0.15
SYNE3-202ENST00000553340 TMEM138Q9NPI0 162 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 TRBV5-5A0A0J9YX44 114 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 SLC31A1O15431 190 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 OR10H2O60403 315 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 AQP8O94778 261 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 MAS1P04201 325 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 GUSBP08236 651 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 UBXN2BQ14CS0 331 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 DEFB115Q30KQ5 88 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 OR7E24Q6IFN5 339 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 DGAT2L6Q6ZPD8 337 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 JAZF1Q86VZ6 243 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 MUC20Q8N307 709 aaPredicted RBP16■□□□□ 0.15
SYNE3-202ENST00000553340 EIF4E3Q8N5X7 224 aaKnown RBP16■□□□□ 0.15
SYNE3-202ENST00000553340 OR1S1Q8NH92 325 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 LMF2Q9BU23 707 aaKnown RBP16■□□□□ 0.15
SYNE3-202ENST00000553340 STEAP1Q9UHE8 339 aa16■□□□□ 0.15
SYNE3-202ENST00000553340 MRM2Q9UI43 246 aaKnown RBP16■□□□□ 0.15
SYNE3-202ENST00000553340 TEX46H3BTG2 121 aa15.99■□□□□ 0.15
SYNE3-202ENST00000553340 SDC3O75056 442 aa15.99■□□□□ 0.15
SYNE3-202ENST00000553340 CDKN2AP42771 156 aaKnown RBP15.99■□□□□ 0.15
SYNE3-202ENST00000553340 UBE2MP61081 183 aaKnown RBP15.99■□□□□ 0.15
SYNE3-202ENST00000553340 MPPED2Q15777 294 aa15.99■□□□□ 0.15
SYNE3-202ENST00000553340 ZNF660Q6AZW8 331 aaPredicted RBP15.99■□□□□ 0.15
SYNE3-202ENST00000553340 C11orf88Q6PI97 169 aa15.99■□□□□ 0.15
SYNE3-202ENST00000553340 TSSK4Q6SA08 328 aa15.99■□□□□ 0.15
SYNE3-202ENST00000553340 MAMSTRQ6ZN01 415 aa15.99■□□□□ 0.15
SYNE3-202ENST00000553340 RD3Q7Z3Z2 195 aa15.99■□□□□ 0.15
SYNE3-202ENST00000553340 KRT77Q7Z794 578 aa15.99■□□□□ 0.15
SYNE3-202ENST00000553340 CA13Q8N1Q1 262 aa15.99■□□□□ 0.15
SYNE3-202ENST00000553340 STPG2Q8N412 459 aa15.99■□□□□ 0.15
SYNE3-202ENST00000553340 OR52H1Q8NGJ2 320 aa15.99■□□□□ 0.15
SYNE3-202ENST00000553340 CCDC74AQ96AQ1 378 aa15.99■□□□□ 0.15
SYNE3-202ENST00000553340 ANKRD9Q96BM1 317 aaPredicted RBP15.99■□□□□ 0.15
SYNE3-202ENST00000553340 ACTR10Q9NZ32 417 aa15.99■□□□□ 0.15
SYNE3-202ENST00000553340 RWDD3Q9Y3V2 267 aa15.99■□□□□ 0.15
SYNE3-202ENST00000553340 GRXCR1A8MXD5 290 aa15.99■□□□□ 0.15
SYNE3-202ENST00000553340 D6RAR5 112 aa15.99■□□□□ 0.15
SYNE3-202ENST00000553340 SLC35E2P0CK97 266 aa15.99■□□□□ 0.15
SYNE3-202ENST00000553340 TPMTP51580 245 aa15.99■□□□□ 0.15
SYNE3-202ENST00000553340 RPS4XP62701 263 aaKnown RBP15.99■□□□□ 0.15
SYNE3-202ENST00000553340 ZNF141Q15928 474 aa15.99■□□□□ 0.15
SYNE3-202ENST00000553340 DCAF12L2Q5VW00 463 aa15.99■□□□□ 0.15
SYNE3-202ENST00000553340 ZNF776Q68DI1 518 aaPredicted RBP15.99■□□□□ 0.15
SYNE3-202ENST00000553340 ZNF417Q8TAU3 575 aa15.99■□□□□ 0.15
SYNE3-202ENST00000553340 GPX7Q96SL4 187 aaPredicted RBP15.99■□□□□ 0.15
SYNE3-202ENST00000553340 CDV3Q9UKY7 258 aaKnown RBP15.99■□□□□ 0.15
SYNE3-202ENST00000553340 EFCAB7A8K855 629 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 ZNF432O94892 652 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 POU2F2P09086 479 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 PLA2G7Q13093 441 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 RUNX3Q13761 415 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 SDR16C5Q8N3Y7 309 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 OR4D10Q8NGI6 311 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 FAM3CQ92520 227 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 RSC1A1Q92681 617 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 TSSK2Q96PF2 358 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 MFFQ9GZY8 342 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 FBXL2Q9UKC9 423 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 MOKQ9UQ07 419 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 KLHDC2Q9Y2U9 406 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 TRAV8-7A0A075B6U6 113 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 TBC1D3DA0A087WVF3 549 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 GGT3PA6NGU5 568 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 TBC1D3LB9A6J9 549 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 BLOC1S5-TXNDC5H3BN57 136 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 WDPCPO95876 746 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 TBC1D3HP0C7X1 549 aa15.98■□□□□ 0.15
SYNE3-202ENST00000553340 AKAIN1P0CW23 69 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms