RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 HLA-DOBP13765 273 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 PTNP21246 168 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 AHCYP23526 432 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 ACVR1BP36896 505 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 ARF1P84077 181 aaKnown RBP11.3□□□□□ -0.6
ACTN1-207ENST00000553290 POU3F1Q03052 451 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-207ENST00000553290 CHRNB3Q05901 458 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 CEACAM16Q2WEN9 425 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 PXKQ7Z7A4 578 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 SNX32Q86XE0 403 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 RBM45Q8IUH3 476 aaKnown RBP11.3□□□□□ -0.6
ACTN1-207ENST00000553290 CCDC36Q8IYA8 594 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 OR4D11Q8NGI4 311 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 OR5J2Q8NH18 312 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 KATNB1Q9BVA0 655 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 SLC19A3Q9BZV2 496 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 NELFAQ9H3P2 528 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 CRLF2Q9HC73 371 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 B3GAT2Q9NPZ5 323 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 GDF2Q9UK05 429 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-207ENST00000553290 BAG5Q9UL15 447 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 MOKQ9UQ07 419 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 CAPN7Q9Y6W3 813 aa11.3□□□□□ -0.6
ACTN1-207ENST00000553290 SLC35F4A4IF30 521 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 ZNF726A6NNF4 738 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 ZNF99A8MXY4 864 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-207ENST00000553290 LRRN3E7EW58 273 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 H7C417 338 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 M0R3G1 203 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 NDUFS7O75251 213 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 OR6A2O95222 327 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 LYPD3O95274 346 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 IGLV1-44P01699 117 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 THY1P04216 161 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 ADORA3P0DMS8 318 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 CRYBA2P53672 197 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 SF3A3Q12874 501 aaKnown RBP eCLIP11.29□□□□□ -0.61e-6■■■■■ 39.2
ACTN1-207ENST00000553290 RAB35Q15286 201 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 NHLRC1Q6VVB1 395 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 WDR88Q6ZMY6 472 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 DNM1P46Q6ZS02 220 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 C20orf196Q8IYI0 205 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 C10orf82Q8WW14 230 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 ZNF583Q96ND8 569 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 ZNF426Q9BUY5 554 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 EMC6Q9BV81 110 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 REG4Q9BYZ8 158 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 POLR2J2Q9GZM3 115 aaKnown RBP11.29□□□□□ -0.6
ACTN1-207ENST00000553290 POLR2J3Q9H1A7 115 aaKnown RBP11.29□□□□□ -0.6
ACTN1-207ENST00000553290 NANSQ9NR45 359 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 MED29Q9NX70 200 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 SLC7A7Q9UM01 511 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 PMF1-BGLAPU3KQ54 211 aa11.29□□□□□ -0.6
ACTN1-207ENST00000553290 ALPK2Q86TB3 2170 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 NAV3Q8IVL0 2385 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 CSPG4Q6UVK1 2322 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 RNF223E7ERA6 249 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 SSX4O60224 188 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 CH25HO95992 272 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 IGKV3-15P01624 115 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 HIST1H2ABP04908 130 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 CECR9P0C854 216 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 CBR1P16152 277 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 MDH1P40925 334 aaKnown RBP11.28□□□□□ -0.6
ACTN1-207ENST00000553290 NUDT6P53370 316 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 DSCR9P59020 149 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 TUBA1BP68363 451 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 TUBA4AP68366 448 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 NAAAQ02083 359 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 ZP4Q12836 540 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 ZNF74Q16587 644 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 CARD17Q5XLA6 110 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 TUBA1AQ71U36 451 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 HIST3H2AQ7L7L0 130 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 CARM1Q86X55 608 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 OR4F15Q8NGB8 312 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 HIST1H2ACQ93077 130 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 ZNF837Q96EG3 531 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-207ENST00000553290 TXNDC15Q96J42 360 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 RHNO1Q9BSD3 238 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 ZNF229Q9UJW7 825 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 AP3M1Q9Y2T2 418 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 SH3GLB1Q9Y371 365 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 TLN2Q9Y4G6 2542 aa11.28□□□□□ -0.6
ACTN1-207ENST00000553290 HIVEP2P31629 2446 aa11.27□□□□□ -0.6
ACTN1-207ENST00000553290 FAM220BPB1ANY3 271 aa11.27□□□□□ -0.61
ACTN1-207ENST00000553290 C11orf98E9PRG8 122 aa11.27□□□□□ -0.61
ACTN1-207ENST00000553290 SERPINI2O75830 405 aa11.27□□□□□ -0.61
ACTN1-207ENST00000553290 ARR3P36575 388 aa11.27□□□□□ -0.61
ACTN1-207ENST00000553290 CAMK2DQ13557 499 aa11.27□□□□□ -0.61
ACTN1-207ENST00000553290 PHYHD1Q5SRE7 291 aa11.27□□□□□ -0.61
ACTN1-207ENST00000553290 ZNF627Q7L945 461 aa11.27□□□□□ -0.61
ACTN1-207ENST00000553290 ARPINQ7Z6K5 226 aa11.27□□□□□ -0.61
ACTN1-207ENST00000553290 TSPYL5Q86VY4 417 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-207ENST00000553290 IL17RDQ8NFM7 739 aa11.27□□□□□ -0.61
ACTN1-207ENST00000553290 OR2T12Q8NG77 320 aa11.27□□□□□ -0.61
ACTN1-207ENST00000553290 OR6N1Q8NGY5 312 aa11.27□□□□□ -0.61
ACTN1-207ENST00000553290 RP9Q8TA86 221 aaKnown RBP11.27□□□□□ -0.61
ACTN1-207ENST00000553290 PRSS27Q9BQR3 290 aa11.27□□□□□ -0.61
ACTN1-207ENST00000553290 ULBP2Q9BZM5 246 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms