RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 K7ERQ8 282 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 CDC7O00311 574 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 GPAA1O43292 621 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 APOA1P02647 267 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 SLC35E2P0CK97 266 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 IGLL1P15814 213 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 CD9P21926 228 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 PRKACBP22694 351 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 CD82P27701 267 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 SSR4P51571 173 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 IST1P53990 364 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 IRX1P78414 480 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-208ENST00000553278 SF3A2Q15428 464 aaKnown RBP4.51□□□□□ -1.69
SCFD1-208ENST00000553278 AANATQ16613 207 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 KLHL22Q53GT1 634 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 TIGD3Q6B0B8 471 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 SLC25A25Q6KCM7 469 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 C2orf66Q6UXQ4 117 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 PPP1R27Q86WC6 154 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 C17orf82Q86X59 251 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-208ENST00000553278 ZNF100Q8IYN0 542 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 CMTM1Q8IZ96 169 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 CMTM8Q8IZV2 173 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 ASCC1Q8N9N2 400 aaKnown RBP4.51□□□□□ -1.69
SCFD1-208ENST00000553278 INO80EQ8NBZ0 244 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-208ENST00000553278 LYPD6BQ8NI32 183 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 ZNF564Q8TBZ8 553 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-208ENST00000553278 SLC7A13Q8TCU3 470 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 CXorf40AQ8TE69 158 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 CAPSLQ8WWF8 208 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 FGGYQ96C11 551 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 RNF126Q9BV68 326 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 ZC4H2Q9NQZ6 224 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 IFNKQ9P0W0 207 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 DCDC2Q9UHG0 476 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 MMP17Q9ULZ9 603 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 SLC17A4Q9Y2C5 497 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 V9GY05 133 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 NEURL4Q96JN8 1562 aa4.51□□□□□ -1.69
SCFD1-208ENST00000553278 MGRN1O60291 552 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 NMT2O60551 498 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 EIF4E2O60573 245 aaKnown RBP4.5□□□□□ -1.69
SCFD1-208ENST00000553278 EEDO75530 441 aaKnown RBP4.5□□□□□ -1.69
SCFD1-208ENST00000553278 FCN3O75636 299 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 DUSP14O95147 198 aaKnown RBP4.5□□□□□ -1.69
SCFD1-208ENST00000553278 VENTXO95231 258 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 CLIC3O95833 236 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 HLA-HP01893 362 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 TCN1P20061 433 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-208ENST00000553278 ATP6V1B2P21281 511 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 IL2RGP31785 369 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 PSMD4P55036 377 aaKnown RBP4.5□□□□□ -1.69
SCFD1-208ENST00000553278 ADARB1P78563 741 aaKnown RBP4.5□□□□□ -1.69
SCFD1-208ENST00000553278 XIAPP98170 497 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 ASAH1Q13510 395 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 RUNX3Q13761 415 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 CYTH1Q15438 398 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 C11orf71Q6IPW1 123 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 FAAP20Q6NZ36 180 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 SPESP1Q6UW49 350 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 MRPL21Q7Z2W9 205 aaKnown RBP4.5□□□□□ -1.69
SCFD1-208ENST00000553278 ZNF571Q7Z3V5 609 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-208ENST00000553278 APRG1Q8IVJ8 170 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 PIANPQ8IYJ0 282 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 PDIK1LQ8N165 341 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 Q8N377 158 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 TCAIMQ8N3R3 496 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 CCDC71LQ8N9Z2 235 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 OR13C9Q8NGT0 318 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 OR52E5Q8NH55 327 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 CD300LFQ8TDQ1 290 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 SMARCD2Q92925 531 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 NAT6Q93015 286 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 TMIGD2Q96BF3 282 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 C18orf12Q96KH6 178 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 C9orf72Q96LT7 481 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 CSPG4P5Q96PW8 444 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 HIST1H4GQ99525 98 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 TMEM246Q9BRR3 403 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 ACTR3CQ9C0K3 210 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-208ENST00000553278 LY9Q9HBG7 655 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 HRASLS2Q9NWW9 162 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 UBQLN1Q9UMX0 589 aaKnown RBP4.5□□□□□ -1.69
SCFD1-208ENST00000553278 MOB4Q9Y3A3 225 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 STYXL1Q9Y6J8 313 aa4.5□□□□□ -1.69
SCFD1-208ENST00000553278 IGKV1D-8A0A087WSZ0 117 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 NDUFAF8A1L188 74 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 HSBP1L1C9JCN9 74 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 CDX4O14627 284 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-208ENST00000553278 GALR3O60755 368 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-208ENST00000553278 TBL1XO60907 577 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 ZNF253O75346 499 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 CLPXO76031 633 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 IFNW1P05000 195 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 CLTAP09496 248 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 OR8U8P0C7N1 319 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 RORAP35398 523 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 MS4A2Q01362 244 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 CDH17Q12864 832 aa4.49□□□□□ -1.69
SCFD1-208ENST00000553278 NCF4Q15080 339 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms