RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 OR9A2Q8NGT5 310 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 MAGEE2Q8TD90 523 aaPredicted RBP4.37□□□□□ -1.71
CKAP4-203ENST00000553039 GPR151Q8TDV0 419 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 SSMEM1Q8WWF3 244 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 ATP6V1E2Q96A05 226 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 SLC7A6OSQ96CW6 309 aaPredicted RBP4.37□□□□□ -1.71
CKAP4-203ENST00000553039 LRRC39Q96DD0 335 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 KTI12Q96EK9 354 aaPredicted RBP4.37□□□□□ -1.71
CKAP4-203ENST00000553039 CNRIP1Q96F85 164 aaPredicted RBP4.37□□□□□ -1.71
CKAP4-203ENST00000553039 SH3YL1Q96HL8 342 aaPredicted RBP4.37□□□□□ -1.71
CKAP4-203ENST00000553039 SIGLEC10Q96LC7 697 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 RBBP8Q99708 897 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 NPAS1Q99742 590 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 TMEM79Q9BSE2 394 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 NAA11Q9BSU3 229 aaPredicted RBP4.37□□□□□ -1.71
CKAP4-203ENST00000553039 PARD6BQ9BYG5 372 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 CHIAQ9BZP6 476 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 IQCGQ9H095 443 aaKnown RBP4.37□□□□□ -1.71
CKAP4-203ENST00000553039 C16orf95Q9H693 158 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 COQ10BQ9H8M1 238 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 ANKRA2Q9H9E1 313 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 POPDC3Q9HBV1 291 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 PALMDQ9NP74 551 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 SLC6A13Q9NSD5 602 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 LEF1Q9UJU2 399 aaPredicted RBP4.37□□□□□ -1.71
CKAP4-203ENST00000553039 SLC9A8Q9Y2E8 581 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 WIPI2Q9Y4P8 454 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 INSIG2Q9Y5U4 225 aa4.37□□□□□ -1.71
CKAP4-203ENST00000553039 EXPH5Q8NEV8 1989 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 A0A096LPK6 155 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 ARPC4-TTLL3A0A0A6YYG9 625 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 IGHV1-69-2A0A0G2JMI3 117 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 A0A1W2PQD3 144 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 ZNF716A6NP11 495 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 ZNF785A8K8V0 405 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 K7EIL1 84 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 TRAF3IP2O43734 574 aaPredicted RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 EIF1BO60739 113 aaKnown RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 NME6O75414 186 aaPredicted RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 TSPAN9O75954 239 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 TOX4O94842 621 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 OXSR1O95747 527 aaPredicted RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 IGLV1-44P01699 117 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 IGHMP01871 453 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 IGFBP1P08833 259 aaPredicted RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 TFPIP10646 304 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 LYL1P12980 280 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 ZNF12P17014 697 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 TSPAN8P19075 237 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 CALCRP30988 508 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 ALDH3B1P43353 468 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 P2RX1P51575 399 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 PGGT1BP53609 377 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 PTTG1IPP53801 180 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 FOXG1P55316 489 aaPredicted RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 SLC25A3Q00325 362 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 FOXF1Q12946 379 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 SNTB2Q13425 540 aaKnown RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 HEPACAMQ14CZ8 416 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 TRADDQ15628 312 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 DEFB112Q30KQ8 113 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 TRMT5Q32P41 509 aaKnown RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 TTMPQ5BVD1 217 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 FBXO48Q5FWF7 155 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 DMRTC1Q5HYR2 192 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 TSPO2Q5TGU0 170 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 GKAP1Q5VSY0 366 aaPredicted RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 ABLIM2Q6H8Q1 611 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 DGAT2L7PQ6IED9 249 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 C11orf88Q6PI97 169 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 CASP12Q6UXS9 341 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 H1FNTQ75WM6 255 aaPredicted RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 IFT20Q8IY31 132 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 PARP8Q8N3A8 854 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 KLHL36Q8N4N3 616 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 TEX9Q8N6V9 391 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 LINC00482Q8N8I6 264 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 SPERTQ8NA61 448 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 PDPRQ8NCN5 879 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 CPEB3Q8NE35 698 aaKnown RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 OR4F17Q8NGA8 305 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 OR10S1Q8NGN2 331 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 NFKBIDQ8NI38 313 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 MUC7Q8TAX7 377 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 GPR119Q8TDV5 335 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 SLC25A43Q8WUT9 341 aaPredicted RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 TMEM234Q8WY98 164 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 BCL2L2Q92843 193 aaPredicted RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 PHF21AQ96BD5 680 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 ZG16BQ96DA0 208 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 RBMXL1Q96E39 390 aaKnown RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 AURKBQ96GD4 344 aaPredicted RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 MARS2Q96GW9 593 aaKnown RBP4.36□□□□□ -1.71
CKAP4-203ENST00000553039 APOPT1Q96IL0 206 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 AMDHD1Q96NU7 426 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 OR4F4Q96R69 305 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 TBX15Q96SF7 602 aa4.36□□□□□ -1.71
CKAP4-203ENST00000553039 DIRC2Q96SL1 478 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms