RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 EFCAB9A8MZ26 197 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 M0R3G1 203 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 PDLIM1O00151 329 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 AKAP8O43823 692 aaKnown RBP12.09□□□□□ -0.47
TROAP-213ENST00000550709 DNAJC8O75937 253 aaPredicted RBP12.09□□□□□ -0.47
TROAP-213ENST00000550709 HRGP04196 525 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 CRYGSP22914 178 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 MPGP29372 298 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 GPR4P46093 362 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 BIDP55957 195 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 ROR2Q01974 943 aaKnown RBP12.09□□□□□ -0.47
TROAP-213ENST00000550709 PRKCDQ05655 676 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 ZP4Q12836 540 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 CAMK2DQ13557 499 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 MELKQ14680 651 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 MTX3Q5HYI7 312 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 HMBOX1Q6NT76 420 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 NHLRC1Q6VVB1 395 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 MBOAT2Q6ZWT7 520 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 SLC35D2Q76EJ3 337 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 LINGO2Q7L985 606 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 CDK20Q8IZL9 346 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 OR52N5Q8NH56 324 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 OR51A7Q8NH64 312 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 HSD17B8Q92506 261 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 NRGNQ92686 78 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 MUCL1Q96DR8 90 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 ASB9Q96DX5 294 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 OR10A4Q9H209 315 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 IL1RAPQ9NPH3 570 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 ITPR2Q14571 2701 aa12.09□□□□□ -0.47
TROAP-213ENST00000550709 TRAV27A0A087WT01 109 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 OR6C65A6NJZ3 312 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 ACOT8O14734 319 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 GSC2O15499 205 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 GADD45GO95257 159 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 IGF2P01344 180 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 RRM2P31350 389 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 ERFP50548 548 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 SMIM11AP58511 58 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 CBX1P83916 185 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 TGFBR3Q03167 851 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 PPA1Q15181 289 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 SEC23BQ15437 767 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 PGM2L1Q6PCE3 622 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 ABHD12BQ7Z5M8 362 aaPredicted RBP12.08□□□□□ -0.48
TROAP-213ENST00000550709 OAFQ86UD1 273 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 CDC20BQ86Y33 519 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 RNF113BQ8IZP6 322 aaKnown RBP12.08□□□□□ -0.48
TROAP-213ENST00000550709 TMEM123Q8N131 208 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 OR13C2Q8NGS9 318 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 OR6N1Q8NGY5 312 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 FAM46AQ96IP4 442 aaKnown RBP12.08□□□□□ -0.48
TROAP-213ENST00000550709 TNFRSF13CQ96RJ3 184 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 C1QTNF6Q9BXI9 259 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 CADM1Q9BY67 442 aaKnown RBP12.08□□□□□ -0.48
TROAP-213ENST00000550709 LINC00470Q9BZP3 86 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 TRIM15Q9C019 465 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 ANKRD19PQ9H560 264 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 INIPQ9NRY2 104 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 FREM1Q5H8C1 2179 aa12.08□□□□□ -0.48
TROAP-213ENST00000550709 ABCA4P78363 2273 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 A0A096LPE4 126 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.07□□□□□ -0.48
TROAP-213ENST00000550709 A0A1W2PPZ6 126 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 A0A1W2PRG6 482 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 FAM221AA4D161 298 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 OR5H1A6NKK0 313 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 MCIDASD6RGH6 385 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 CDC42EP2O14613 210 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 CLOCKO15516 846 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 KLF4O43474 513 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 ATP5HO75947 161 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 BCL10O95999 233 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 ARF1P84077 181 aaKnown RBP12.07□□□□□ -0.48
TROAP-213ENST00000550709 CHRNB3Q05901 458 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 TRAP1Q12931 704 aaKnown RBP12.07□□□□□ -0.48
TROAP-213ENST00000550709 TOP3AQ13472 1001 aaPredicted RBP12.07□□□□□ -0.48
TROAP-213ENST00000550709 FLOT2Q14254 428 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 GABRA6Q16445 453 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 FAM98BQ52LJ0 330 aaKnown RBP12.07□□□□□ -0.48
TROAP-213ENST00000550709 HIKESHIQ53FT3 197 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 TIMM23BQ5SRD1 257 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 PHYHD1Q5SRE7 291 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 OR7E24Q6IFN5 339 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 IGFN1Q86VF2 1251 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 C20orf196Q8IYI0 205 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 OR4K5Q8NGD3 323 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 LIPHQ8WWY8 451 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 ZNF837Q96EG3 531 aaPredicted RBP12.07□□□□□ -0.48
TROAP-213ENST00000550709 PLPPR2Q96GM1 343 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 DHRS1Q96LJ7 313 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 MUS81Q96NY9 551 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 HS3ST6Q96QI5 342 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 ZNF347Q96SE7 839 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 USB1Q9BQ65 265 aaKnown RBP12.07□□□□□ -0.48
TROAP-213ENST00000550709 CRLF2Q9HC73 371 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 GPR35Q9HC97 309 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 TMCC3Q9ULS5 477 aa12.07□□□□□ -0.48
TROAP-213ENST00000550709 AURKCQ9UQB9 309 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms