RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 SLC19A3Q9BZV2 496 aa9.47□□□□□ -0.89
VTI1BP3-201ENST00000550220 RAB1BQ9H0U4 201 aa9.47□□□□□ -0.89
VTI1BP3-201ENST00000550220 IKZF5Q9H5V7 419 aa9.47□□□□□ -0.89
VTI1BP3-201ENST00000550220 ZNF442Q9H7R0 627 aa9.47□□□□□ -0.89
VTI1BP3-201ENST00000550220 TMEM160Q9NX00 188 aa9.47□□□□□ -0.89
VTI1BP3-201ENST00000550220 FBXL3Q9UKT7 428 aa9.47□□□□□ -0.89
VTI1BP3-201ENST00000550220 SPEF1Q9Y4P9 236 aa9.47□□□□□ -0.89
VTI1BP3-201ENST00000550220 LOC390937A0A1W2PQ73 354 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 MS4A18H0YCH9 400 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 TRAF3IP2O43734 574 aaPredicted RBP9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 CHP2O43745 196 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 BGLAPP02818 100 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 CECR9P0C854 216 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 AQP1P29972 269 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 PPOXP50336 477 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 LGALS3BPQ08380 585 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 NFYCQ13952 458 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 ADIPOQQ15848 244 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 MS4A18Q3C1V0 323 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 GLIPR1L2Q4G1C9 344 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 ZNF627Q7L945 461 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 LINGO2Q7L985 606 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 TMEM123Q8N131 208 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 C10orf111Q8N326 155 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 ZNF525Q8N782 197 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 OR6N1Q8NGY5 312 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 OR5J2Q8NH18 312 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 SPATA3Q8NHX4 192 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 SLC26A7Q8TE54 656 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 NEU4Q8WWR8 484 aaPredicted RBP9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 MS4A3Q96HJ5 214 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 MPP4Q96JB8 637 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 MCHR1Q99705 422 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 PIMREGQ9BSJ6 248 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 PLK3Q9H4B4 646 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 KAT8Q9H7Z6 458 aaKnown RBP9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 LPAR3Q9UBY5 353 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 CDC42EP3Q9UKI2 254 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 POFUT2Q9Y2G5 429 aa9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 SONP18583 2426 aaKnown RBP9.46□□□□□ -0.9
VTI1BP3-201ENST00000550220 ZANQ9Y493 2812 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 A0A096LNT2 108 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 KIAA1324LA8MWY0 1029 aaPredicted RBP9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 M0R3G1 203 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 PLPP3O14495 311 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 MGRN1O60291 552 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 TPST2O60704 377 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 NPPAP01160 153 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 IFNA14P01570 189 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 HIST1H2ABP04908 130 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 NPR2P20594 1047 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 AHCYP23526 432 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 CAPZA2P47755 286 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 GZMKP49863 264 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 IDH3GP51553 393 aaPredicted RBP9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 LSM11P83369 360 aaKnown RBP eCLIP9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 POU3F1Q03052 451 aaPredicted RBP9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 DUSP7Q16829 419 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 COQ5Q5HYK3 327 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 TTC33Q6PID6 262 aaPredicted RBP9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 LINC00114Q6XXX2 140 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 HIST3H2AQ7L7L0 130 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 DPPA2Q7Z7J5 298 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 COMTD1Q86VU5 262 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 PTOV1Q86YD1 416 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 SMYD1Q8NB12 490 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 HIST1H2ACQ93077 130 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 ARHGDIGQ99819 225 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 VRK1Q99986 396 aaPredicted RBP9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 PRR14Q9BWN1 585 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 RSPO3Q9BXY4 272 aaPredicted RBP9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 NELFAQ9H3P2 528 aa9.45□□□□□ -0.9
VTI1BP3-201ENST00000550220 HEATR1Q9H583 2144 aaKnown RBP9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 A0A0G2JND7 137 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 SLC35F4A4IF30 521 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 TRAPPC13A5PLN9 417 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 GPRIN2O60269 458 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 EDF1O60869 148 aaKnown RBP9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 ADORA3P0DMS8 318 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 CBLP22681 906 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 LSP1P33241 339 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 PCGF2P35227 344 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 EVX1P49640 407 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 MTPNP58546 118 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 TUBA1BP68363 451 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 TUBA4AP68366 448 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 ZP4Q12836 540 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 DAG1Q14118 895 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 NPTX1Q15818 432 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 GSG1Q2KHT4 349 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 ENTPD8Q5MY95 495 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 C6orf52Q5T4I8 152 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 VHLLQ6RSH7 139 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 UGT2A3Q6UWM9 527 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 TUBA1AQ71U36 451 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 CCDC80Q76M96 950 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 PIWIL3Q7Z3Z3 882 aaKnown RBP9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 OR10A6Q8NH74 314 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 OR6X1Q8NH79 312 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 KCNK17Q96T54 332 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms