RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 RPS6KB2Q9UBS0 482 aa11.11□□□□□ -0.63
PTCH1-218ENST00000548945 TMEFF2Q9UIK5 374 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-218ENST00000548945 CMAHPQ9Y471 501 aa11.11□□□□□ -0.63
PTCH1-218ENST00000548945 MGAM2Q2M2H8 2515 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 TRAV36DV7A0A075B6V5 113 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 M0R082 166 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 IGFBP1P08833 259 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-218ENST00000548945 ETS2P15036 469 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 IFNGR1P15260 489 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 NR4A1P22736 598 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 PRKAR1BP31321 381 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 POLR2JP52435 117 aaKnown RBP11.1□□□□□ -0.63
PTCH1-218ENST00000548945 DVL1P1P54792 670 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-218ENST00000548945 SRSF2Q01130 221 aaKnown RBP11.1□□□□□ -0.63
PTCH1-218ENST00000548945 NPRL3Q12980 569 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 SNTB2Q13425 540 aaKnown RBP11.1□□□□□ -0.63
PTCH1-218ENST00000548945 RGNQ15493 299 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 ADRM1Q16186 407 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 FAM91A1Q658Y4 838 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 NXNQ6DKJ4 435 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 MDP1Q86V88 176 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 C20orf196Q8IYI0 205 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 OR6S1Q8NH40 331 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 ZNF417Q8TAU3 575 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 LRRC8CQ8TDW0 803 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 GTF2H4Q92759 462 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 TAAR8Q969N4 342 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 VPS33AQ96AX1 596 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 ZNF837Q96EG3 531 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-218ENST00000548945 ZNF587Q96SQ5 575 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-218ENST00000548945 B3GNT2Q9NY97 397 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 CORINQ9Y5Q5 1042 aa11.1□□□□□ -0.63
PTCH1-218ENST00000548945 DYSFO75923 2080 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 A0A0A6YYJ9 748 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 ZNF503-AS2A6NEH8 195 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 SYNGR3O43761 229 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 ADRA2AP08913 450 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 GRPRP30550 384 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 IL2RGP31785 369 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 SRP14P37108 136 aaKnown RBP11.09□□□□□ -0.63
PTCH1-218ENST00000548945 HOXC5Q00444 222 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 GTDC1Q4AE62 458 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 SLC9B1Q4ZJI4 515 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 C6orf10Q5SRN2 563 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 REP15Q6BDI9 236 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 SNX32Q86XE0 403 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 CDK20Q8IZL9 346 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 ZCCHC24Q8N2G6 241 aaKnown RBP11.09□□□□□ -0.63
PTCH1-218ENST00000548945 SCAIQ8N9R8 606 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 MRPL24Q96A35 216 aaKnown RBP11.09□□□□□ -0.63
PTCH1-218ENST00000548945 SLC41A3Q96GZ6 507 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 SNX18Q96RF0 628 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 PAIP1Q9H074 479 aaKnown RBP11.09□□□□□ -0.63
PTCH1-218ENST00000548945 MS4A5Q9H3V2 200 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 B3GAT2Q9NPZ5 323 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 KLHL14Q9P2G3 628 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 SEC14L4Q9UDX3 406 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 SPEF1Q9Y4P9 236 aa11.09□□□□□ -0.63
PTCH1-218ENST00000548945 PKD1L1Q8TDX9 2849 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 IGKV1D-42A0A075B6H8 117 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 A0A1B0GWA3 101 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 GMNCA6NCL1 334 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 B4DSR2 109 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 C5orf58C9J3I9 102 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 CLIC1O00299 241 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 UBDO15205 165 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 NUDT7P0C024 238 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 KITP10721 976 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 ZNF35P13682 527 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 ZNF14P17017 642 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-218ENST00000548945 HOXB9P17482 250 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-218ENST00000548945 GLRXP35754 106 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 CAPZA2P47755 286 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 GSG1Q2KHT4 349 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 ALG10BQ5I7T1 473 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 ULK3Q6PHR2 472 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 DHRS4L2Q6PKH6 230 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 DEF8Q6ZN54 512 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 MEX3DQ86XN8 651 aaKnown RBP11.08□□□□□ -0.64
PTCH1-218ENST00000548945 KRT73Q86Y46 540 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 UEVLDQ8IX04 471 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 MIER2Q8N344 545 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 ZFAND2BQ8WV99 257 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 MAL2Q969L2 176 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 SLC47A1Q96FL8 570 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 ZNF75AQ96N20 296 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 EPYCQ99645 322 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 SPATA5L1Q9BVQ7 753 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 NSRP1Q9H0G5 558 aaKnown RBP11.08□□□□□ -0.64
PTCH1-218ENST00000548945 TESQ9UGI8 421 aaKnown RBP11.08□□□□□ -0.64
PTCH1-218ENST00000548945 FBXL3Q9UKT7 428 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 NOX1Q9Y5S8 564 aa11.08□□□□□ -0.64
PTCH1-218ENST00000548945 A0A087WUJ7 227 aa11.07□□□□□ -0.64
PTCH1-218ENST00000548945 SH3PXD2BA1X283 911 aa11.07□□□□□ -0.64
PTCH1-218ENST00000548945 MS4A18H0YCH9 400 aa11.07□□□□□ -0.64
PTCH1-218ENST00000548945 M0R233 179 aa11.07□□□□□ -0.64
PTCH1-218ENST00000548945 M0R3G1 203 aa11.07□□□□□ -0.64
PTCH1-218ENST00000548945 HLA-HP01893 362 aa11.07□□□□□ -0.64
PTCH1-218ENST00000548945 VIMP08670 466 aaKnown RBP11.07□□□□□ -0.64
PTCH1-218ENST00000548945 ARAFP10398 606 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms