RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 AMBRA1Q9C0C7 1298 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 CRLF2Q9HC73 371 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 GPR35Q9HC97 309 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 C20orf141Q9NUB4 165 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 ABCD2Q9UBJ2 740 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 POU2F3Q9UKI9 436 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 LAMP3Q9UQV4 416 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 NOX1Q9Y5S8 564 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 V9GYQ6 96 aa13.82□□□□□ -0.2
DDX54-205ENST00000548786 ZNF726A6NNF4 738 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 SHISA9B4DS77 424 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 BLOC1S5-TXNDC5H3BN57 136 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 AKAP8O43823 692 aaKnown RBP13.81□□□□□ -0.2
DDX54-205ENST00000548786 IFNW1P05000 195 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 IFNGR1P15260 489 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 FUT1P19526 365 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 CD40P25942 277 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 BIDP55957 195 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 PRPS1P60891 318 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 ADAM8P78325 824 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 NKX6-1P78426 367 aaPredicted RBP13.81□□□□□ -0.2
DDX54-205ENST00000548786 LSM11P83369 360 aaKnown RBP eCLIP13.81□□□□□ -0.2
DDX54-205ENST00000548786 MELKQ14680 651 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 CEACAM16Q2WEN9 425 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 SLC22A25Q6T423 547 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 SLC46A3Q7Z3Q1 461 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 C17orf78Q8N4C9 275 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 PIK3C3Q8NEB9 887 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 TMEM171Q8WVE6 324 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 TMEM239Q8WW34 195 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 CCT8L2Q96SF2 557 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 LINC00470Q9BZP3 86 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 FKRPQ9H9S5 495 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 ZNF229Q9UJW7 825 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 A4GNTQ9UNA3 340 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 AMDHD2Q9Y303 409 aa13.81□□□□□ -0.2
DDX54-205ENST00000548786 LOC102725191A0A1B0GVB3 256 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 OR6C65A6NJZ3 312 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 DCTN3O75935 186 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 WNT11O96014 354 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 MT-ND1P03886 318 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 SOD3P08294 240 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 MSX2P35548 267 aaPredicted RBP13.8□□□□□ -0.2
DDX54-205ENST00000548786 CAPZA2P47755 286 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 UBE2NP61088 152 aaKnown RBP13.8□□□□□ -0.2
DDX54-205ENST00000548786 MXRA7P84157 204 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 IFI44LQ53G44 452 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 Q5PR19 223 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 CBLL1Q75N03 491 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 PXKQ7Z7A4 578 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 TGIF2LYQ8IUE0 185 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 KRTAP1-3Q8IUG1 177 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 ZNF611Q8N823 705 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 OR6N1Q8NGY5 312 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 SMAP2Q8WU79 429 aaPredicted RBP13.8□□□□□ -0.2
DDX54-205ENST00000548786 GEMIN6Q8WXD5 167 aaKnown RBP13.8□□□□□ -0.2
DDX54-205ENST00000548786 BCL2L2Q92843 193 aaPredicted RBP13.8□□□□□ -0.2
DDX54-205ENST00000548786 SGTBQ96EQ0 304 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 RADILQ96JH8 1075 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 PRRC1Q96M27 445 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 SLC19A3Q9BZV2 496 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 TAS2R5Q9NYW4 299 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 TAGLN3Q9UI15 199 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 MED31Q9Y3C7 131 aa13.8□□□□□ -0.2
DDX54-205ENST00000548786 MAGED1Q9Y5V3 778 aaPredicted RBP13.8□□□□□ -0.2
DDX54-205ENST00000548786 NDUFAB1O14561 156 aa13.79□□□□□ -0.2
DDX54-205ENST00000548786 OR7A10O76100 309 aa13.79□□□□□ -0.2
DDX54-205ENST00000548786 F13BP05160 661 aa13.79□□□□□ -0.2
DDX54-205ENST00000548786 ASAH2BP0C7U1 165 aa13.79□□□□□ -0.2
DDX54-205ENST00000548786 RBM34P42696 430 aaKnown RBP13.79□□□□□ -0.2
DDX54-205ENST00000548786 ST3GAL3Q11203 375 aa13.79□□□□□ -0.2
DDX54-205ENST00000548786 ANKRD16Q6P6B7 361 aa13.79□□□□□ -0.2
DDX54-205ENST00000548786 B3GLCTQ6Y288 498 aa13.79□□□□□ -0.2
DDX54-205ENST00000548786 SLC35D2Q76EJ3 337 aa13.79□□□□□ -0.2
DDX54-205ENST00000548786 C20orf196Q8IYI0 205 aa13.79□□□□□ -0.2
DDX54-205ENST00000548786 FAM86B1Q8N7N1 296 aa13.79□□□□□ -0.2
DDX54-205ENST00000548786 ANKK1Q8NFD2 765 aa13.79□□□□□ -0.2
DDX54-205ENST00000548786 FNDC11Q9BVV2 318 aa13.79□□□□□ -0.2
DDX54-205ENST00000548786 POLR2J2Q9GZM3 115 aaKnown RBP13.79□□□□□ -0.2
DDX54-205ENST00000548786 POLR2J3Q9H1A7 115 aaKnown RBP13.79□□□□□ -0.2
DDX54-205ENST00000548786 NELFAQ9H3P2 528 aa13.79□□□□□ -0.2
DDX54-205ENST00000548786 CISD1Q9NZ45 108 aaKnown RBP13.79□□□□□ -0.2
DDX54-205ENST00000548786 MED13LQ71F56 2210 aa13.79□□□□□ -0.2
DDX54-205ENST00000548786 ACANP16112 2415 aa13.79□□□□□ -0.2
DDX54-205ENST00000548786 ALPK2Q86TB3 2170 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 ARID1AO14497 2285 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 ATP6V1G2-DDX39BF2Z307 99 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 FFAR1O14842 300 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 IFI30P13284 250 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 CD99P14209 185 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 PTAFRP25105 342 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 IFNA8P32881 189 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 CDKN1AP38936 164 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 AQP2P41181 271 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 CSNK1A1P48729 337 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 PTH2RP49190 550 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 RPL18Q07020 188 aaKnown RBP13.78□□□□□ -0.2
DDX54-205ENST00000548786 PGGHGQ32M88 737 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 GLYATQ6IB77 296 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 NHLRC1Q6VVB1 395 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms