RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 IFNGP01579 166 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 MLLT10P55197 1068 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 RPL27P61353 136 aaKnown RBP25.66■■□□□ 1.7
BRF1-213ENST00000548421 SLC17A1Q14916 467 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 KRT80Q6KB66 452 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 PTCHD4Q6ZW05 846 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 SLC35D2Q76EJ3 337 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 OR8J1Q8NGP2 316 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 UBE2FQ969M7 185 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 ZNF175Q9Y473 711 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 TEX13CA0A0J9YWL9 993 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 RIIAD1A6NNX1 92 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 PRKYO43930 277 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 IFNGR1P15260 489 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 HIST1H1CP16403 213 aaKnown RBP25.66■■□□□ 1.7
BRF1-213ENST00000548421 TCEANCQ8N8B7 351 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 OR9K2Q8NGE7 335 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 OR5M9Q8NGP3 310 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 FNDC9Q8TBE3 224 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 RNF128Q8TEB7 428 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 RASD2Q96D21 266 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 PRRG4Q9BZD6 226 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 RASSF1Q9NS23 344 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 ZNF226Q9NYT6 803 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 KLHL21Q9UJP4 597 aa25.66■■□□□ 1.7
BRF1-213ENST00000548421 TRAF3IP2O43734 574 aaPredicted RBP25.65■■□□□ 1.7
BRF1-213ENST00000548421 SLC2A10O95528 541 aa25.65■■□□□ 1.7
BRF1-213ENST00000548421 BCL10O95999 233 aa25.65■■□□□ 1.7
BRF1-213ENST00000548421 ZNF3P17036 446 aa25.65■■□□□ 1.7
BRF1-213ENST00000548421 EFNB1P98172 346 aa25.65■■□□□ 1.7
BRF1-213ENST00000548421 CD47Q08722 323 aa25.65■■□□□ 1.7
BRF1-213ENST00000548421 KRR1Q13601 381 aaKnown RBP25.65■■□□□ 1.7
BRF1-213ENST00000548421 MAD2L1BPQ15013 274 aaPredicted RBP25.65■■□□□ 1.7
BRF1-213ENST00000548421 NHLRC1Q6VVB1 395 aa25.65■■□□□ 1.7
BRF1-213ENST00000548421 ARIH2OSQ8N7S6 290 aa25.65■■□□□ 1.7
BRF1-213ENST00000548421 IL4I1Q96RQ9 567 aa25.65■■□□□ 1.7
BRF1-213ENST00000548421 PNPLA3Q9NST1 481 aa25.65■■□□□ 1.7
BRF1-213ENST00000548421 ZNF716A6NP11 495 aa25.64■■□□□ 1.69
BRF1-213ENST00000548421 AHRRA9YTQ3 701 aa25.64■■□□□ 1.69
BRF1-213ENST00000548421 SLC16A1P53985 500 aa25.64■■□□□ 1.69
BRF1-213ENST00000548421 SNRPGP62308 76 aaKnown RBP25.64■■□□□ 1.69
BRF1-213ENST00000548421 RASGEF1BQ0VAM2 473 aa25.64■■□□□ 1.69
BRF1-213ENST00000548421 MELKQ14680 651 aa25.64■■□□□ 1.69
BRF1-213ENST00000548421 FAM205BPQ63HN1 556 aa25.64■■□□□ 1.69
BRF1-213ENST00000548421 ADGRE4PQ86SQ3 457 aa25.64■■□□□ 1.69
BRF1-213ENST00000548421 OR52E2Q8NGJ4 325 aa25.64■■□□□ 1.69
BRF1-213ENST00000548421 OR4K13Q8NH42 304 aa25.64■■□□□ 1.69
BRF1-213ENST00000548421 RHOXF1Q8NHV9 184 aa25.64■■□□□ 1.69
BRF1-213ENST00000548421 ZNF519Q8TB69 540 aa25.64■■□□□ 1.69
BRF1-213ENST00000548421 TMEM163Q8TC26 289 aa25.64■■□□□ 1.69
BRF1-213ENST00000548421 ASB10Q8WXI3 467 aa25.64■■□□□ 1.69
BRF1-213ENST00000548421 MED29Q9NX70 200 aa25.64■■□□□ 1.69
BRF1-213ENST00000548421 UBAP1Q9NZ09 502 aa25.64■■□□□ 1.69
BRF1-213ENST00000548421 GPR52Q9Y2T5 361 aa25.64■■□□□ 1.69
BRF1-213ENST00000548421 SLC22A20A6NK97 555 aa25.63■■□□□ 1.69
BRF1-213ENST00000548421 TLX2O43763 284 aaPredicted RBP25.63■■□□□ 1.69
BRF1-213ENST00000548421 GABRB1P18505 474 aa25.63■■□□□ 1.69
BRF1-213ENST00000548421 ACVR1BP36896 505 aa25.63■■□□□ 1.69
BRF1-213ENST00000548421 KHDRBS1Q07666 443 aaKnown RBP eCLIP25.63■■□□□ 1.69
BRF1-213ENST00000548421 PDK3Q15120 406 aa25.63■■□□□ 1.69
BRF1-213ENST00000548421 MESTQ5EB52 335 aa25.63■■□□□ 1.69
BRF1-213ENST00000548421 ZNF362Q5T0B9 420 aaPredicted RBP25.63■■□□□ 1.69
BRF1-213ENST00000548421 ARMC4Q5T2S8 1044 aa25.63■■□□□ 1.69
BRF1-213ENST00000548421 EEF1A1P5Q5VTE0 462 aa25.63■■□□□ 1.69
BRF1-213ENST00000548421 CREB3L2Q70SY1 520 aa25.63■■□□□ 1.69
BRF1-213ENST00000548421 JAZF1Q86VZ6 243 aa25.63■■□□□ 1.69
BRF1-213ENST00000548421 ABHD3Q8WU67 409 aa25.63■■□□□ 1.69
BRF1-213ENST00000548421 FBLIM1Q8WUP2 373 aa25.63■■□□□ 1.69
BRF1-213ENST00000548421 KLHL9Q9P2J3 617 aa25.63■■□□□ 1.69
BRF1-213ENST00000548421 KMT2BQ9UMN6 2715 aaPredicted RBP25.62■■□□□ 1.69
BRF1-213ENST00000548421 XKRYO14609 159 aa25.62■■□□□ 1.69
BRF1-213ENST00000548421 AQP8O94778 261 aa25.62■■□□□ 1.69
BRF1-213ENST00000548421 FCGR2AP12318 317 aa25.62■■□□□ 1.69
BRF1-213ENST00000548421 RNPS1Q15287 305 aaKnown RBP25.62■■□□□ 1.69
BRF1-213ENST00000548421 SF3B4Q15427 424 aaKnown RBP eCLIP25.62■■□□□ 1.69
BRF1-213ENST00000548421 PLXDC2Q6UX71 529 aa25.62■■□□□ 1.69
BRF1-213ENST00000548421 GFRALQ6UXV0 394 aa25.62■■□□□ 1.69
BRF1-213ENST00000548421 HDDC2Q7Z4H3 204 aa25.62■■□□□ 1.69
BRF1-213ENST00000548421 ADCK1Q86TW2 530 aa25.62■■□□□ 1.69
BRF1-213ENST00000548421 SDR9C7Q8NEX9 313 aa25.62■■□□□ 1.69
BRF1-213ENST00000548421 TXNDC15Q96J42 360 aa25.62■■□□□ 1.69
BRF1-213ENST00000548421 FN3KQ9H479 309 aa25.62■■□□□ 1.69
BRF1-213ENST00000548421 CLCF1Q9UBD9 225 aa25.62■■□□□ 1.69
BRF1-213ENST00000548421 A6NIZ1 184 aa25.61■■□□□ 1.69
BRF1-213ENST00000548421 TPOP07202 933 aa25.61■■□□□ 1.69
BRF1-213ENST00000548421 EDN3P14138 238 aa25.61■■□□□ 1.69
BRF1-213ENST00000548421 ABOP16442 354 aa25.61■■□□□ 1.69
BRF1-213ENST00000548421 RAP1BP61224 184 aa25.61■■□□□ 1.69
BRF1-213ENST00000548421 RAP1AP62834 184 aa25.61■■□□□ 1.69
BRF1-213ENST00000548421 ZNF585AQ6P3V2 769 aa25.61■■□□□ 1.69
BRF1-213ENST00000548421 FAM26EQ8N5C1 309 aa25.61■■□□□ 1.69
BRF1-213ENST00000548421 SLC37A3Q8NCC5 494 aa25.61■■□□□ 1.69
BRF1-213ENST00000548421 CNIH3Q8TBE1 160 aa25.61■■□□□ 1.69
BRF1-213ENST00000548421 FAM57AQ8TBR7 257 aa25.61■■□□□ 1.69
BRF1-213ENST00000548421 APH1BQ8WW43 257 aa25.61■■□□□ 1.69
BRF1-213ENST00000548421 TRIB1Q96RU8 372 aa25.61■■□□□ 1.69
BRF1-213ENST00000548421 AASSQ9UDR5 926 aa25.61■■□□□ 1.69
BRF1-213ENST00000548421 PCDHGB5Q9Y5G0 923 aa25.61■■□□□ 1.69
BRF1-213ENST00000548421 IGKV3D-15A0A087WSY6 115 aa25.6■■□□□ 1.69
BRF1-213ENST00000548421 BIDP55957 195 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms