RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 CRISP3P54108 245 aa10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 SH3BGRP55822 239 aaPredicted RBP10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 GKAP1Q5VSY0 366 aaPredicted RBP10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 SHQ1Q6PI26 577 aaKnown RBP10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 C3orf56Q8N813 242 aa10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 FAM169BQ8N8A8 192 aa10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 OR9I1Q8NGQ6 314 aa10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 ZNF417Q8TAU3 575 aa10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 GCDHQ92947 438 aaPredicted RBP10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 YIPF5Q969M3 257 aa10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 LRRC37BQ96QE4 947 aa10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 OR2M2Q96R28 347 aa10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 ZNF587Q96SQ5 575 aaPredicted RBP10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 SPATA9Q9BWV2 254 aa10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 TPT1P8Q9HAU6 139 aa10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 CALML5Q9NZT1 146 aa10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 ZIM2Q9NZV7 527 aa10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 MYEF2Q9P2K5 600 aaKnown RBP10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 B3GAT1Q9P2W7 334 aa10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 DUSP13Q9UII6 198 aa10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 FBXO9Q9UK97 447 aaPredicted RBP10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 USP22Q9UPT9 525 aa10.29□□□□□ -0.76
TRAFD1-205ENST00000548277 ZNF99A8MXY4 864 aaPredicted RBP10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 M0R233 179 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 PPIHO43447 177 aaKnown RBP10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 SYNGR3O43761 229 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 CDC14BO60729 498 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 SERPINI2O75830 405 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 NUDT7P0C024 238 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 PATE4P0C8F1 98 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 SAGP10523 405 aaPredicted RBP10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 NAT2P11245 290 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 NQO1P15559 274 aaKnown RBP10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 EGR1P18146 543 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 PTDSS1P48651 473 aaKnown RBP10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 POLR2JP52435 117 aaKnown RBP10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 CAMK2DQ13557 499 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 GSG1Q2KHT4 349 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 TRMT5Q32P41 509 aaKnown RBP10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 C6orf10Q5SRN2 563 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 RNF220Q5VTB9 566 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 ZNF813Q6ZN06 617 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 DEF8Q6ZN54 512 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 PIK3C3Q8NEB9 887 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 MAL2Q969L2 176 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 MRPL24Q96A35 216 aaKnown RBP10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 VPS33AQ96AX1 596 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 TMEM186Q96B77 213 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 ITCHQ96J02 903 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 TXNDC15Q96J42 360 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 ZNF317Q96PQ6 595 aaPredicted RBP10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 OR51B6Q9H340 312 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 ARMC7Q9H6L4 198 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 RMND5AQ9H871 391 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 SDR39U1Q9NRG7 319 aaPredicted RBP10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 ZNF275Q9NSD4 429 aaPredicted RBP10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 MED29Q9NX70 200 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 POFUT2Q9Y2G5 429 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 USH1CQ9Y6N9 552 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 DSPPQ9NZW4 1301 aa10.28□□□□□ -0.76
TRAFD1-205ENST00000548277 A0A096LPI6 279 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 A0A0G2JPF8 293 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 TMEM247A6NEH6 219 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 HNRNPCL2B2RXH8 293 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 HNRNPCL3B7ZW38 293 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 MS4A18H0YCH9 400 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 AIM2O14862 343 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 HNRNPCL1O60812 293 aaKnown RBP10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 HPRP00739 348 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 ZCCHC18P0CG32 403 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 HNRNPCL4P0DMR1 293 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 B4GALT1P15291 398 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 PCMT1P22061 227 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 RAB1AP62820 205 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 RAB39AQ14964 217 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 MS4A18Q3C1V0 323 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 AGBL2Q5U5Z8 902 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 EPGNQ6UW88 154 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 UGT2A3Q6UWM9 527 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 MSANTD1Q6ZTZ1 278 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 H1FNTQ75WM6 255 aaPredicted RBP10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 ZNF771Q7L3S4 317 aaPredicted RBP10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 PEG10Q86TG7 708 aaKnown RBP10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 WDFY1Q8IWB7 410 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 UEVLDQ8IX04 471 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 MIER2Q8N344 545 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 IL17RDQ8NFM7 739 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 SEMA6DQ8NFY4 1073 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 OR6N1Q8NGY5 312 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 ZNF418Q8TF45 676 aaPredicted RBP10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 RDH5Q92781 318 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 MS4A5Q9H3V2 200 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 MOV10Q9HCE1 1003 aaKnown RBP10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 B3GNT2Q9NY97 397 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 PCDHB10Q9UN67 800 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 RCE1Q9Y256 329 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 IFT52Q9Y366 437 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 GRIP1Q9Y3R0 1128 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 SPEF1Q9Y4P9 236 aa10.27□□□□□ -0.77
TRAFD1-205ENST00000548277 LOC105371242A0A075B767 164 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms