RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 MMAAQ8IVH4 418 aaKnown RBP1.88□□□□□ -2.11
CCDC38-204ENST00000546816 OR10G4Q8NGN3 311 aa1.88□□□□□ -2.11
CCDC38-204ENST00000546816 ACTRT1Q8TDG2 376 aa1.88□□□□□ -2.11
CCDC38-204ENST00000546816 ZFP90Q8TF47 636 aa1.88□□□□□ -2.11
CCDC38-204ENST00000546816 CTNNBL1Q8WYA6 563 aaPredicted RBP1.88□□□□□ -2.11
CCDC38-204ENST00000546816 AURKBQ96GD4 344 aaPredicted RBP1.88□□□□□ -2.11
CCDC38-204ENST00000546816 CLCC1Q96S66 551 aa1.88□□□□□ -2.11
CCDC38-204ENST00000546816 RNF2Q99496 336 aa1.88□□□□□ -2.11
CCDC38-204ENST00000546816 OSBPL11Q9BXB4 747 aa1.88□□□□□ -2.11
CCDC38-204ENST00000546816 CAPS2Q9BXY5 557 aa1.88□□□□□ -2.11
CCDC38-204ENST00000546816 ACTR6Q9GZN1 396 aa1.88□□□□□ -2.11
CCDC38-204ENST00000546816 LRRN3Q9H3W5 708 aa1.88□□□□□ -2.11
CCDC38-204ENST00000546816 RIBC2Q9H4K1 309 aa1.88□□□□□ -2.11
CCDC38-204ENST00000546816 MRPL47Q9HD33 250 aaKnown RBP1.88□□□□□ -2.11
CCDC38-204ENST00000546816 UFSP2Q9NUQ7 469 aa1.88□□□□□ -2.11
CCDC38-204ENST00000546816 THUMPD1Q9NXG2 353 aaKnown RBP1.88□□□□□ -2.11
CCDC38-204ENST00000546816 POLDIP2Q9Y2S7 368 aa1.88□□□□□ -2.11
CCDC38-204ENST00000546816 TRAV40A0A0B4J280 105 aa1.87□□□□□ -2.11
CCDC38-204ENST00000546816 PRSS37A4D1T9 235 aa1.87□□□□□ -2.11
CCDC38-204ENST00000546816 POLR2DO15514 142 aaKnown RBP1.87□□□□□ -2.11
CCDC38-204ENST00000546816 B3GALNT1O75752 331 aa1.87□□□□□ -2.11
CCDC38-204ENST00000546816 GKN3PP0CG01 181 aa1.87□□□□□ -2.11
CCDC38-204ENST00000546816 NCF1P14598 390 aaPredicted RBP1.87□□□□□ -2.11
CCDC38-204ENST00000546816 LAP3P28838 519 aa1.87□□□□□ -2.11
CCDC38-204ENST00000546816 RGS4P49798 205 aa1.87□□□□□ -2.11
CCDC38-204ENST00000546816 PCM1Q15154 2024 aa1.87□□□□□ -2.11
CCDC38-204ENST00000546816 PRR9Q5T870 116 aa1.87□□□□□ -2.11
CCDC38-204ENST00000546816 KCNIP4Q6PIL6 250 aa1.87□□□□□ -2.11
CCDC38-204ENST00000546816 GET4Q7L5D6 327 aaPredicted RBP1.87□□□□□ -2.11
CCDC38-204ENST00000546816 COL27A1Q8IZC6 1860 aaPredicted RBP1.87□□□□□ -2.11
CCDC38-204ENST00000546816 SLC38A6Q8IZM9 456 aa1.87□□□□□ -2.11
CCDC38-204ENST00000546816 FAM86B1Q8N7N1 296 aa1.87□□□□□ -2.11
CCDC38-204ENST00000546816 FAM133AQ8N9E0 248 aa1.87□□□□□ -2.11
CCDC38-204ENST00000546816 SMARCD2Q92925 531 aa1.87□□□□□ -2.11
CCDC38-204ENST00000546816 BMFQ96LC9 184 aa1.87□□□□□ -2.11
CCDC38-204ENST00000546816 CCT7Q99832 543 aa1.87□□□□□ -2.11
CCDC38-204ENST00000546816 NOX3Q9HBY0 568 aa1.87□□□□□ -2.11
CCDC38-204ENST00000546816 SIRT7Q9NRC8 400 aa1.87□□□□□ -2.11
CCDC38-204ENST00000546816 HPF1Q9NWY4 346 aa1.87□□□□□ -2.11
CCDC38-204ENST00000546816 CALYQ9NYX4 217 aa1.87□□□□□ -2.11
CCDC38-204ENST00000546816 PLA2R1Q13018 1463 aa1.87□□□□□ -2.11
CCDC38-204ENST00000546816 RPAP1Q9BWH6 1393 aaPredicted RBP1.86□□□□□ -2.11
CCDC38-204ENST00000546816 TCRBV9S1A1TA0A576 114 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 K7EPI3 171 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 MED7O43513 233 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 UPK3AO75631 287 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 ALDOBP05062 364 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 IGKV4-1P06312 121 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 CSF3P09919 207 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 UBTFL1P0CB47 393 aaPredicted RBP1.86□□□□□ -2.11
CCDC38-204ENST00000546816 OPRD1P41143 372 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 ACAA2P42765 397 aaKnown RBP1.86□□□□□ -2.11
CCDC38-204ENST00000546816 CASP4P49662 377 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 OR5I1Q13606 314 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 PDK4Q16654 411 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 GUCA2BQ16661 112 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 DUSP7Q16829 419 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 KLHL38Q2WGJ6 581 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 TTLL9Q3SXZ7 439 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 SFT2D3Q587I9 215 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 C15orf56Q8N910 161 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 EMG1Q92979 244 aaKnown RBP1.86□□□□□ -2.11
CCDC38-204ENST00000546816 CXorf40BQ96DE9 158 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 OXGR1Q96P68 337 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 OR2A5Q96R48 311 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 PARD6BQ9BYG5 372 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 LIN28AQ9H9Z2 209 aaKnown RBP1.86□□□□□ -2.11
CCDC38-204ENST00000546816 LY9Q9HBG7 655 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 SLC40A1Q9NP59 571 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 SPATA7Q9P0W8 599 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 CD84Q9UIB8 345 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 GGA2Q9UJY4 613 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 MRPS7Q9Y2R9 242 aaKnown RBP1.86□□□□□ -2.11
CCDC38-204ENST00000546816 TIMM10BQ9Y5J6 103 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 OTOGLQ3ZCN5 2332 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 CABIN1Q9Y6J0 2220 aa1.86□□□□□ -2.11
CCDC38-204ENST00000546816 GPR179Q6PRD1 2367 aa1.85□□□□□ -2.11
CCDC38-204ENST00000546816 RBMY1BA6NDE4 496 aaKnown RBP1.85□□□□□ -2.11
CCDC38-204ENST00000546816 RBMY1EA6NEQ0 496 aaKnown RBP1.85□□□□□ -2.11
CCDC38-204ENST00000546816 ZNF233A6NK53 670 aa1.85□□□□□ -2.11
CCDC38-204ENST00000546816 OR5B21A6NL26 309 aa1.85□□□□□ -2.11
CCDC38-204ENST00000546816 RGS16O15492 202 aaPredicted RBP1.85□□□□□ -2.11
CCDC38-204ENST00000546816 CD5LO43866 347 aa1.85□□□□□ -2.11
CCDC38-204ENST00000546816 ATP5LO75964 103 aa1.85□□□□□ -2.11
CCDC38-204ENST00000546816 RCBTB2O95199 551 aa1.85□□□□□ -2.11
CCDC38-204ENST00000546816 OXSR1O95747 527 aaPredicted RBP1.85□□□□□ -2.11
CCDC38-204ENST00000546816 FGF1P05230 155 aa1.85□□□□□ -2.11
CCDC38-204ENST00000546816 RBMY1DP0C7P1 496 aaKnown RBP1.85□□□□□ -2.11
CCDC38-204ENST00000546816 RBMY1A1P0DJD3 496 aaKnown RBP1.85□□□□□ -2.11
CCDC38-204ENST00000546816 PGAM1P18669 254 aa1.85□□□□□ -2.11
CCDC38-204ENST00000546816 TCN1P20061 433 aaPredicted RBP1.85□□□□□ -2.11
CCDC38-204ENST00000546816 PCMT1P22061 227 aa1.85□□□□□ -2.11
CCDC38-204ENST00000546816 GNA11P29992 359 aa1.85□□□□□ -2.11
CCDC38-204ENST00000546816 QARSP47897 775 aaKnown RBP1.85□□□□□ -2.11
CCDC38-204ENST00000546816 FGF8P55075 233 aaPredicted RBP1.85□□□□□ -2.11
CCDC38-204ENST00000546816 PRSS8Q16651 343 aa1.85□□□□□ -2.11
CCDC38-204ENST00000546816 KCTD21Q4G0X4 260 aa1.85□□□□□ -2.11
CCDC38-204ENST00000546816 C10orf120Q5SQS8 335 aa1.85□□□□□ -2.11
CCDC38-204ENST00000546816 FAM92BQ6ZTR7 304 aa1.85□□□□□ -2.11
CCDC38-204ENST00000546816 PGAM4Q8N0Y7 254 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms