RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 NDUFA5Q16718 116 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 MEP1AQ16819 746 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 TMEM44Q2T9K0 475 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 AARDQ4LEZ3 155 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 RBM48Q5RL73 367 aaKnown RBP7.61□□□□□ -1.19
VPS29-203ENST00000546588 CTRB2Q6GPI1 263 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 IGFL2Q6UWQ7 119 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 ZNF730Q6ZMV8 503 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 ETV3LQ6ZN32 361 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 GRINAQ7Z429 371 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 NRMQ8IXM6 262 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 ENTHD1Q8IYW4 607 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 AMER2Q8N7J2 671 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 OR10G3Q8NGC4 313 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 RHOXF1Q8NHV9 184 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 APH1BQ8WW43 257 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 KIAA1143Q96AT1 154 aaPredicted RBP7.61□□□□□ -1.19
VPS29-203ENST00000546588 RNF31Q96EP0 1072 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 MED30Q96HR3 178 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 MUS81Q96NY9 551 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 APOL4Q9BPW4 351 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 POLDIP3Q9BY77 421 aaKnown RBP7.61□□□□□ -1.19
VPS29-203ENST00000546588 ZBTB20Q9HC78 741 aaPredicted RBP7.61□□□□□ -1.19
VPS29-203ENST00000546588 C20orf141Q9NUB4 165 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 MED17Q9NVC6 651 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 GALNT8Q9NY28 637 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 IL17BQ9UHF5 180 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 SIGLEC7Q9Y286 467 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 MED31Q9Y3C7 131 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 CDH10Q9Y6N8 788 aa7.61□□□□□ -1.19
VPS29-203ENST00000546588 EP300Q09472 2414 aaPredicted RBP7.61□□□□□ -1.19
VPS29-203ENST00000546588 A0A087WZY1 265 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 SH3D21A4FU49 640 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 ACOD1A6NK06 481 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 BHLHE40O14503 412 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 MAGEB3O15480 346 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 TRIM3O75382 744 aaPredicted RBP7.6□□□□□ -1.19
VPS29-203ENST00000546588 WBP4O75554 376 aaKnown RBP7.6□□□□□ -1.19
VPS29-203ENST00000546588 CRTAPO75718 401 aaPredicted RBP7.6□□□□□ -1.19
VPS29-203ENST00000546588 CEACAM4O75871 244 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 CLIC3O95833 236 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 PLATP00750 562 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 MT-ATP6P00846 226 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 ASAH2BP0C7U1 165 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 SMIM18P0DKX4 95 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 ZNF17P17021 662 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 MAKP20794 623 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 CRHBPP24387 322 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 APEX1P27695 318 aaKnown RBP7.6□□□□□ -1.19
VPS29-203ENST00000546588 OTX2P32243 289 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 THBS2P35442 1172 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 SLC15A1P46059 708 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 HLCSP50747 726 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 RRADP55042 308 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 COPZ1P61923 177 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 QPRTQ15274 297 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 CNN3Q15417 329 aaKnown RBP7.6□□□□□ -1.19
VPS29-203ENST00000546588 ZNF239Q16600 458 aaKnown RBP7.6□□□□□ -1.19
VPS29-203ENST00000546588 COL28A1Q2UY09 1125 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 CTU2Q2VPK5 515 aaKnown RBP7.6□□□□□ -1.19
VPS29-203ENST00000546588 PLPPR5Q32ZL2 321 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 NDUFAF6Q330K2 333 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 GLYR1Q49A26 553 aaPredicted RBP7.6□□□□□ -1.19
VPS29-203ENST00000546588 ACER2Q5QJU3 275 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 KRT80Q6KB66 452 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 TTC33Q6PID6 262 aaPredicted RBP7.6□□□□□ -1.19
VPS29-203ENST00000546588 C16orf47Q6ZP98 133 aaPredicted RBP7.6□□□□□ -1.19
VPS29-203ENST00000546588 RTL4Q6ZR62 310 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 KRT74Q7RTS7 529 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 SLC46A3Q7Z3Q1 461 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 MARCH3Q86UD3 253 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 LNX2Q8N448 690 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 ZNF614Q8N883 585 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 WDSUB1Q8N9V3 476 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 OR2M3Q8NG83 312 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 OR8D4Q8NGM9 314 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 ABHD4Q8TB40 342 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 CYGBQ8WWM9 190 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 TMEM234Q8WY98 164 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 BPIFA2Q96DR5 249 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 ZNF845Q96IR2 970 aaPredicted RBP7.6□□□□□ -1.19
VPS29-203ENST00000546588 MRGPRX4Q96LA9 322 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 CNBD2Q96M20 576 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 KLHDC3Q9BQ90 382 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 LHPPQ9H008 270 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 GPN2Q9H9Y4 310 aaPredicted RBP7.6□□□□□ -1.19
VPS29-203ENST00000546588 TAS2R10Q9NYW0 307 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 CRNNQ9UBG3 495 aaPredicted RBP7.6□□□□□ -1.19
VPS29-203ENST00000546588 OSGIN1Q9UJX0 560 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 BAIAP2Q9UQB8 552 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 PCDHGB1Q9Y5G3 927 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 GMPPBQ9Y5P6 360 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 MRPS18BQ9Y676 258 aaKnown RBP7.6□□□□□ -1.19
VPS29-203ENST00000546588 FREM3P0C091 2139 aa7.6□□□□□ -1.19
VPS29-203ENST00000546588 LOC105371267A0A1B0GV96 52 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 NPIPB13A6NJU9 1138 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 NPIPB4C9JG80 1138 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 FTCDNL1E5RQL4 147 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 GTPBP1O00178 669 aaKnown RBP7.59□□□□□ -1.19
VPS29-203ENST00000546588 SLC1A7O00341 560 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms