RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 MPP4Q96JB8 637 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 TNFRSF13CQ96RJ3 184 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 ARHGDIGQ99819 225 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 RSPO3Q9BXY4 272 aaPredicted RBP8.15□□□□□ -1.1
YBX3-218ENST00000546298 CA10Q9NS85 328 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 SEC14L4Q9UDX3 406 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 POFUT2Q9Y2G5 429 aa8.15□□□□□ -1.1
YBX3-218ENST00000546298 SLC35F4A4IF30 521 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 TRAPPC13A5PLN9 417 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 MS4A18H0YCH9 400 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 M0R3H8 397 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 NDUFS8O00217 210 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 PLPP3O14495 311 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 TPST2O60704 377 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 IFNA14P01570 189 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 IGKV3-15P01624 115 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 OPN1SWP03999 348 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 HIST1H2ABP04908 130 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 OR4A8P0C604 315 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 TROVE2P10155 538 aaKnown RBP eCLIP8.14□□□□□ -1.11
YBX3-218ENST00000546298 H2AFXP16104 143 aaPredicted RBP8.14□□□□□ -1.11
YBX3-218ENST00000546298 NPR2P20594 1047 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 USF1P22415 310 aaPredicted RBP8.14□□□□□ -1.11
YBX3-218ENST00000546298 PCGF2P35227 344 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 PDLIM4P50479 330 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 IDH3GP51553 393 aaPredicted RBP8.14□□□□□ -1.11
YBX3-218ENST00000546298 TUBA1BP68363 451 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 TUBA4AP68366 448 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 NPRL3Q12980 569 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 EFNB3Q15768 340 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 DUSP7Q16829 419 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 MST1LQ2TV78 715 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 MS4A18Q3C1V0 323 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 CARD17Q5XLA6 110 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 TTC33Q6PID6 262 aaPredicted RBP8.14□□□□□ -1.11
YBX3-218ENST00000546298 VHLLQ6RSH7 139 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 LINC00114Q6XXX2 140 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 TUBA1AQ71U36 451 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 HIST3H2AQ7L7L0 130 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 RETREG3Q86VR2 466 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 ZNF525Q8N782 197 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 ZNF540Q8NDQ6 660 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 OR5J2Q8NH18 312 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 OR10A6Q8NH74 314 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 C10orf105Q8TEF2 133 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 NANOS1Q8WY41 292 aaKnown RBP8.14□□□□□ -1.11
YBX3-218ENST00000546298 HTRA1Q92743 480 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 HIST1H2ACQ93077 130 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 VRK1Q99986 396 aaPredicted RBP8.14□□□□□ -1.11
YBX3-218ENST00000546298 ECSITQ9BQ95 431 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 ULBP2Q9BZM5 246 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 SLC19A3Q9BZV2 496 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 RAB1BQ9H0U4 201 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 NELFAQ9H3P2 528 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 DENND2DQ9H6A0 471 aaPredicted RBP8.14□□□□□ -1.11
YBX3-218ENST00000546298 ZNF385DQ9H6B1 395 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 ZNF442Q9H7R0 627 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 KAT8Q9H7Z6 458 aaKnown RBP8.14□□□□□ -1.11
YBX3-218ENST00000546298 FBXL3Q9UKT7 428 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 BAG5Q9UL15 447 aa8.14□□□□□ -1.11
YBX3-218ENST00000546298 CELSR1Q9NYQ6 3014 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 CPSF4LA6NMK7 179 aaKnown RBP8.13□□□□□ -1.11
YBX3-218ENST00000546298 KIAA1324LA8MWY0 1029 aaPredicted RBP8.13□□□□□ -1.11
YBX3-218ENST00000546298 HPRP00739 348 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 NPPAP01160 153 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 ADORA3P0DMS8 318 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 HLA-DOBP13765 273 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 CD247P20963 164 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 LSP1P33241 339 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 CSNK1A1P48729 337 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 PPOXP50336 477 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 VLDLRP98155 873 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 SELPLGQ14242 412 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 MAPRE2Q15555 327 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 ADIPOQQ15848 244 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 GSG1Q2KHT4 349 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 VMACQ2NL98 169 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 TMEM249Q2WGJ8 235 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 TRMT5Q32P41 509 aaKnown RBP8.13□□□□□ -1.11
YBX3-218ENST00000546298 CHRFAM7AQ494W8 412 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 MMEL1Q495T6 779 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 COQ5Q5HYK3 327 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 ENTPD8Q5MY95 495 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 CYB5R2Q6BCY4 276 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 NANOGP8Q6NSW7 305 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 ERICH5Q6P6B1 374 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 ZNF813Q6ZN06 617 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 MDP1Q86V88 176 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 HIPK1Q86Z02 1210 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 GPR32P1Q8NGA4 272 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 OR8J3Q8NGG0 315 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 OR6T1Q8NGN1 323 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 TXNDC15Q96J42 360 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 MOGAT1Q96PD6 335 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 WFDC6Q9BQY6 131 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 PIMREGQ9BSJ6 248 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 EMC6Q9BV81 110 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 PLK3Q9H4B4 646 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 NANOGQ9H9S0 305 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 NANSQ9NR45 359 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms