RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 LIME1Q9H400 295 aa6.5□□□□□ -1.37
CPSF7-224ENST00000544990 ESRP2Q9H6T0 727 aaKnown RBP6.5□□□□□ -1.37
CPSF7-224ENST00000544990 CCM2LQ9NUG4 571 aaPredicted RBP6.5□□□□□ -1.37
CPSF7-224ENST00000544990 TAS2R16Q9NYV7 291 aa6.5□□□□□ -1.37
CPSF7-224ENST00000544990 MALT1Q9UDY8 824 aa6.5□□□□□ -1.37
CPSF7-224ENST00000544990 B3GALT5Q9Y2C3 310 aa6.5□□□□□ -1.37
CPSF7-224ENST00000544990 PLEKHA6Q9Y2H5 1048 aa6.5□□□□□ -1.37
CPSF7-224ENST00000544990 COA3Q9Y2R0 106 aaPredicted RBP6.5□□□□□ -1.37
CPSF7-224ENST00000544990 ZNF281Q9Y2X9 895 aa6.5□□□□□ -1.37
CPSF7-224ENST00000544990 SH3GLB1Q9Y371 365 aa6.5□□□□□ -1.37
CPSF7-224ENST00000544990 ANKRD17O75179 2603 aaKnown RBP6.49□□□□□ -1.37
CPSF7-224ENST00000544990 TRAPPC13A5PLN9 417 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 CPSF4LA6NMK7 179 aaKnown RBP6.49□□□□□ -1.37
CPSF7-224ENST00000544990 FTCDNL1E5RQL4 147 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 AKAP8O43823 692 aaKnown RBP6.49□□□□□ -1.37
CPSF7-224ENST00000544990 RAD51DO75771 328 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 NQO1P15559 274 aaKnown RBP6.49□□□□□ -1.37
CPSF7-224ENST00000544990 COX5AP20674 150 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 DRD4P21917 467 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 EDNRAP25101 427 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 PRDX6P30041 224 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 GRPRP30550 384 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 KDELR2P33947 212 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 NUDT2P50583 147 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 P2RY4P51582 365 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 IL1RL1Q01638 556 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 C1DQ13901 141 aaKnown RBP6.49□□□□□ -1.37
CPSF7-224ENST00000544990 PPA1Q15181 289 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 ACKR1Q16570 336 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 LRRC23Q53EV4 343 aaPredicted RBP6.49□□□□□ -1.37
CPSF7-224ENST00000544990 C1QTNF12Q5T7M4 302 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 NIPAL3Q6P499 406 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 CREB3L2Q70SY1 520 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 H1FNTQ75WM6 255 aaPredicted RBP6.49□□□□□ -1.37
CPSF7-224ENST00000544990 CARM1Q86X55 608 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 SLC15A3Q8IY34 581 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 MICU2Q8IYU8 434 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 C10orf53Q8N6V4 93 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 SCAIQ8N9R8 606 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 PIGTQ969N2 578 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 TAAR8Q969N4 342 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 FBXW5Q969U6 566 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 MBD6Q96DN6 1003 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 MPP4Q96JB8 637 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 OXGR1Q96P68 337 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 ZNF385AQ96PM9 386 aaKnown RBP6.49□□□□□ -1.37
CPSF7-224ENST00000544990 FOXC2Q99958 501 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 WFDC6Q9BQY6 131 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 PTDSS2Q9BVG9 487 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 POLR2J2Q9GZM3 115 aaKnown RBP6.49□□□□□ -1.37
CPSF7-224ENST00000544990 PCDHAC1Q9H158 963 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 POLR2J3Q9H1A7 115 aaKnown RBP6.49□□□□□ -1.37
CPSF7-224ENST00000544990 MYLK2Q9H1R3 596 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 SLCO5A1Q9H2Y9 848 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 DSCAMO60469 2012 aa6.49□□□□□ -1.37
CPSF7-224ENST00000544990 DCHS2Q6V1P9 2916 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 IGKV1D-42A0A075B6H8 117 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 LOC102725191A0A1B0GVB3 256 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 A0A1W2PPR1 153 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 OR5H1A6NKK0 313 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 ZNF587BE7ETH6 402 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 FZD7O75084 574 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 GMNNO75496 209 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 DCTN3O75935 186 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 OR6A2O95222 327 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 WNT11O96014 354 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 MT-ATP6P00846 226 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 BGLAPP02818 100 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 HIST1H2ABP04908 130 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 RAC2P15153 192 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 CBLP22681 906 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 PAX7P23759 505 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 MPGP29372 298 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 SLC7A2P52569 658 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 CLDN17P56750 224 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 TAS2R41P59536 307 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 SELENOWP63302 87 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 LIPEQ05469 1076 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 PMS2P3Q13401 168 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 NPTX1Q15818 432 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 GABRA6Q16445 453 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 DEFB113Q30KQ7 82 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 CYBRD1Q53TN4 286 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 NCMAPQ5T1S8 102 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 TSPO2Q5TGU0 170 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 KLHL17Q6TDP4 642 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 KLHL24Q6TFL4 600 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 SPNS3Q6ZMD2 512 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 DEF8Q6ZN54 512 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 ZNF704Q6ZNC4 412 aaPredicted RBP6.48□□□□□ -1.37
CPSF7-224ENST00000544990 HIST3H2AQ7L7L0 130 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 RBM45Q8IUH3 476 aaKnown RBP6.48□□□□□ -1.37
CPSF7-224ENST00000544990 EPHX4Q8IUS5 362 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 P3H2Q8IVL5 708 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 UEVLDQ8IX04 471 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 KDM8Q8N371 416 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 C17orf78Q8N4C9 275 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 ZIC4Q8N9L1 334 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 ADPRHL1Q8NDY3 354 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 C1orf162Q8NEQ5 155 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms